Pairwise Alignments

Query, 270 a.a., protein-glutamate O-methyltransferase CheR from Methanococcus maripaludis S2

Subject, 1390 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  145 bits (366), Expect = 5e-39
 Identities = 79/273 (28%), Positives = 148/273 (54%), Gaps = 7/273 (2%)

Query: 2   DDMYFKRIKRDIGTKLKIQVDQYKDTYILRRVSVRMRLCKCKDFKEYYEYLTKNPSEYEK 61
           +++  + I   + T+       YK   +LRR+  RM++    D   Y  YL   P E  +
Sbjct: 245 NELALREILAALRTRTGHDFRHYKQATVLRRIERRMQVNALPDMPSYARYLQGRPEETPE 304

Query: 62  LENTLTVNVTEFWRDRTVYNEL-RNVFEKMVTDRTV---RSIRIWSAGCSSGEEPYGLAV 117
           L   + + VT F+RDR  +  L R++   ++  +     +++R+WSA CS+GEE Y L +
Sbjct: 305 LLADMLIGVTNFFRDRDAFEALERDIIPALLEQKAGTDDKTLRVWSAACSTGEEAYSLGM 364

Query: 118 MIKELMEKHNQ-KFLRVLITATDLDKEILERAKEGTYISKQFKNMDQDVIDKYFDKLNDK 176
           ++ +          L++ + ATD+D   LE A+ G Y      ++    + +YF K +  
Sbjct: 365 LLADQAAITGAGSELKLQVFATDIDDRALETARNGAYPEAILTDVSPTRLRQYFVK-DQN 423

Query: 177 EYQIKKEIKRMVQFKKHDLIKEGPMKDMNMVLCRNVIIYFEKDIQEKLFMKFHEALNDGG 236
           ++++ KE++  + F +H+++++ P   ++++ CRN++IY +KDIQ ++   FH ALN GG
Sbjct: 424 QFRLHKELRERILFARHNILRDPPFSRLDLISCRNLMIYLDKDIQIEVLRMFHFALNPGG 483

Query: 237 YLVLGKTEMLHGDSRNAFKPSNHRERIYQKLKI 269
           YL LG +E     ++  F P + + RIY+  ++
Sbjct: 484 YLFLGNSETADACAQ-LFTPVDKKNRIYRAREV 515