Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 565 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  125 bits (313), Expect = 5e-33
 Identities = 85/337 (25%), Positives = 156/337 (46%), Gaps = 15/337 (4%)

Query: 113 VSNTFSELHTIFKSLEQGDFTIRANTDRKYNALQVTTNNAIVNVSTMVNDLKKQIEYLNA 172
           V +  + LH +  + EQ    +R++ D    AL    N+    V+   +     +E +  
Sbjct: 234 VRSVVNPLHQLRSTFEQ----VRSSNDFSLRAL----NHGRDEVAQAASAFNALLERVQT 285

Query: 173 ELLKAKEDLVRAEETSEQVADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDAADD 232
            LL+      R ++T++Q +  A QVA ++  Q+    D++  +E  S     +  +  D
Sbjct: 286 ALLEVMVGANRIDQTAQQTSTMAKQVAKSSVQQNEAATDIASAIEQMSASIGQINASTRD 345

Query: 233 TVTAAIEIEENSEMGVKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLIKDV 292
               A +    +  G + +    E    +T  +    + I  LGNE+ +I  +  +IK V
Sbjct: 346 AHARAQDAAGAAGCGAQAISRTAEETDQVTRQVGRASETISALGNETDRITTIVEVIKAV 405

Query: 293 AEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKV-EA 351
           AEQT LLALNA+IEAARAG+ G+GFAVVA E++ LAE  + S E+I   ++ +     +A
Sbjct: 406 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLAERTRTSAEEIRDMVSSMQASARQA 465

Query: 352 TIDLGI------SGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNV 405
             ++ I        +   +    +++E+  +   + E +   S+ +       +     +
Sbjct: 466 VAEMAIVTSRTRESQALSENAAASMNEILQSASLVSEGISAVSQALIEQDRTTQIIAQRI 525

Query: 406 ETALKDSQDIASISEEFAATAEELTASAEEQSRIMNE 442
           E   + SQ+  S  E  AA +  L  +A +  + +N+
Sbjct: 526 EAVAQMSQENCSTGEHAAAVSRSLDGAAADLRQAINQ 562