Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  117 bits (294), Expect = 7e-31
 Identities = 81/294 (27%), Positives = 148/294 (50%), Gaps = 16/294 (5%)

Query: 150 NNAIVNVSTMVNDLKKQIEYLNAELLKAKEDLVRAEETSEQVADAASQVATAAADQSAKL 209
           N+ +  ++     +++ +  L  E++ A   L  A E   Q+++   Q A    +Q  ++
Sbjct: 243 NDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISN---QSADGMKEQQYQI 299

Query: 210 QDVSDQLEATSEITSAVTDAA---DDTVTAAIEIEENSEMGVKKVENAIETMQSITNVIE 266
             V+    A +++ +AV D A   +D+ + A+     S+ G ++  + + ++Q + ++I 
Sbjct: 300 TQVAT---AMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIG 356

Query: 267 NLGKAIQELGNESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKS 326
             G+ + EL  +S +IN V  +I+ +A+QT LLALNA+IEAARAG++G+GFAVVA E+++
Sbjct: 357 EAGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRT 416

Query: 327 LAEEIKKSVEDINRTINGVNRKVEATIDLGISGKDEVDKGVIAIDEVNGAFLKIKESVET 386
           LA   + S  +I   I  +    +   D     +  +DK V   +      + I+ES+  
Sbjct: 417 LAGRTQDSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIAN 476

Query: 387 TSEKINSIKVN-------AERAVNNVETALKDSQDIASISEEFAATAEELTASA 433
            ++    I          A+    NVE     SQ++A  S++ A    ELT  A
Sbjct: 477 IADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLA 530