Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  126 bits (316), Expect = 3e-33
 Identities = 91/327 (27%), Positives = 160/327 (48%), Gaps = 20/327 (6%)

Query: 125 KSLEQGDFTIRANTDRK--YNALQVTTNNAIVNVSTMVNDLKKQIEYLN--AELLKAKED 180
           + +  GD T  ++T R+     LQ T  +  V++  ++  +   +  +   AE L A  +
Sbjct: 366 RRIADGDLTHDSSTTRQDELGLLQNTMQHMTVSLRGLIGGIGNGVTQIATAAEQLSAVSE 425

Query: 181 LVRAEETSEQVADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDAADDTVTAAIEI 240
              A  T ++  +   QVATA  + ++ +Q+V+   E  S+              AA + 
Sbjct: 426 QTSAGVTLQK--NEVDQVATAMNEMASTVQEVARNTEDASQ--------------AAKQA 469

Query: 241 EENSEMGVKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLIKDVAEQTGLLA 300
            E +  G   V++A   +  +   ++ LG+A+Q L  +S KI  V  +IK VAEQT LLA
Sbjct: 470 SERAAHGSSVVQHATREIGQLAGEVQQLGEAMQRLTEDSGKIGSVIDVIKAVAEQTNLLA 529

Query: 301 LNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEATIDLGISGK 360
           LNA+IEAARAG+ G+GFAVVA E++SLA+  + S  +I   I  + +   A   L  +  
Sbjct: 530 LNAAIEAARAGEQGRGFAVVADEVRSLAQRTQNSTTEIEALIQALQKGTGAASGLMDASL 589

Query: 361 DEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKDSQDIASISE 420
              +  V+   +   A ++I +S+ T  +    I   AE+     E   +    +  I++
Sbjct: 590 QRTEGTVVLARQAEQALVEINQSIGTIEQMSQQISAAAEQQSAVTEEINRSVLSVRDIAD 649

Query: 421 EFAATAEELTASAEEQSRIMNEIDDAI 447
           + A+  E+  AS  E +R+ +++   +
Sbjct: 650 QSASATEQSAASTVELARLGSDLQSMV 676



 Score = 42.7 bits (99), Expect = 4e-08
 Identities = 74/372 (19%), Positives = 149/372 (40%), Gaps = 24/372 (6%)

Query: 86  EEMFKTVISDFEKLKKDENSLKTYKKDVSNTFSELHTIFKSLEQGDFTIRANTDRKYNAL 145
           ++ F  ++   +K+ +    +     DVS TF  L  + K++   D T+RA  +     +
Sbjct: 156 KQTFDQLVGINQKVDEALKPIIKVSDDVSATFENL--LNKTI---DDTLRAPNETGIRQV 210

Query: 146 QVTTN--NAIVNVS-------TMVNDLKKQIEYLNAELLKAKEDLVRAEETSEQVADAAS 196
           ++  +  N + N         ++ N   +Q  Y  A+ L A+ D  R++   E  A+AA 
Sbjct: 211 KIAGDLRNGMTNFRLVFRRYLSVPNADNRQATYKAADALIAQVDAARSQLPVE--ANAAV 268

Query: 197 QVATAAADQSAKLQ-DVSDQLEATSEITSAVTDAADDTVTAAIEIEENSEMGVKKVEN-A 254
             A  A  Q   L   +SD L+ T +I + +   +  T   A ++     +  KK +  A
Sbjct: 269 DAALVALKQYKVLMTSISDMLQQTEQIRNDLQQQSVATAARADDLAALQVISAKKEQQTA 328

Query: 255 IETMQSITNVIENLG--KAIQELGNESKKINEVTVLIKDVAEQTGLLALNASIEAARAGD 312
           +  + S+  V+  +G   A       +  +N   +  + +A+   L   +++      G 
Sbjct: 329 VVQLLSVALVVLLVGIFAAFLITRQITVPLNSTVIAARRIADGD-LTHDSSTTRQDELGL 387

Query: 313 AGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEATIDLGISGKDEVDKGVIAIDE 372
                  +   ++ L   I   V  I      ++   E T       K+EVD+   A++E
Sbjct: 388 LQNTMQHMTVSLRGLIGGIGNGVTQIATAAEQLSAVSEQTSAGVTLQKNEVDQVATAMNE 447

Query: 373 VNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKDSQDIASISEEFAATAEELTAS 432
           +      ++E    T +   + K  +ERA +        +++I  ++ E     E +   
Sbjct: 448 MAST---VQEVARNTEDASQAAKQASERAAHGSSVVQHATREIGQLAGEVQQLGEAMQRL 504

Query: 433 AEEQSRIMNEID 444
            E+  +I + ID
Sbjct: 505 TEDSGKIGSVID 516