Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 658 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  117 bits (294), Expect = 9e-31
 Identities = 81/331 (24%), Positives = 154/331 (46%), Gaps = 12/331 (3%)

Query: 118 SELHTIFKSLEQGDFTIRANTDRKYNALQVTTNNAIVNVSTMVNDLKKQIEYLNAELLKA 177
           SEL     +L  GD ++R N         VT+N+ I  +S   N + + +  + + +  A
Sbjct: 337 SELVRQADALGAGDLSVRLN---------VTSNDEIGQLSGSFNKMSEALSSMVSHIRTA 387

Query: 178 KEDLVRAEETSEQVADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDAADDTVTAA 237
            +++         ++  A +       QS ++  ++  +E  S  +  + D   +T   A
Sbjct: 388 AQEVSTRANVLSGLSGGAFE---GMEQQSGEITSMAGAVEEFSATSMNIADNMGNTERLA 444

Query: 238 IEIEENSEMGVKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLIKDVAEQTG 297
            E  + + +G   +E A  ++Q I   + +  K I  LG  S++I  +  +I  +A+QT 
Sbjct: 445 QENAQQTRIGRTSMEEASSSLQQIATSLSSTAKVIDTLGQRSQEIGSIVGVITSIADQTN 504

Query: 298 LLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEATIDLGI 357
           LLALNA+IEAARAG+ G+GFAVVA E++SLA   +++ ++I+  I  + ++    I    
Sbjct: 505 LLALNAAIEAARAGEQGRGFAVVADEVRSLASRTREATDEISGMIASIQQETGNAISTMQ 564

Query: 358 SGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKDSQDIAS 417
            G   + +G+    +V  A  +I E   +   +  +I    +   +       + Q IA 
Sbjct: 565 QGNTLMQEGLSLNAKVASALAQIDEQSRSAGHQFAAITTATQEQSSTATMLSSNLQSIAM 624

Query: 418 ISEEFAATAEELTASAEEQSRIMNEIDDAIE 448
            + E       L  +A+E + +  E+   ++
Sbjct: 625 ANSEQRQVMSNLAITAQELNGLATELRHEVD 655