Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 546 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  135 bits (341), Expect = 3e-36
 Identities = 94/331 (28%), Positives = 163/331 (49%), Gaps = 18/331 (5%)

Query: 113 VSNTFSELHTIFKSLEQGDFTIRANTDR----KYNALQVTTNNAIVNVSTMVNDLKKQIE 168
           V++   +L T+  ++  G+  +R   D     + + L  T N  ++ +  ++  +K    
Sbjct: 217 VTSRVEQLDTMIAAISDGEGDLRGRLDDSGRDELSLLARTFNGLMMKLQQLIGTIKSDAV 276

Query: 169 YLNAELLKAKEDLVRAEETSEQVADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTD 228
            L+A +         +E+ S +      Q+ATA    S           A  E+ S+  +
Sbjct: 277 SLDARVTGLNHSAKESEKISTEQNANLEQIATAVHQLS----------HAVHEVASSSQN 326

Query: 229 AADDTVTAAIEIEENSEMGVKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVL 288
           A  DT  A   I+E++ +    V  ++E +Q +  V+ +  + IQ L +ESK+I  V  +
Sbjct: 327 ALSDTEHANNLIKESNAV----VGQSVERVQQLAGVVSHASEVIQNLASESKQIVTVLDV 382

Query: 289 IKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRK 348
           I+ +AEQT LLALNA+IEAARAG+ G+GFAVVA E+++LA   ++S EDI R + G+   
Sbjct: 383 IRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQQSTEDIQRMVAGLESG 442

Query: 349 VEATIDLGISGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETA 408
           V   +    SG  +VD  V A   +  A  ++ E+V  T + I  I    E+    V+  
Sbjct: 443 VSEAVSAIDSGTRQVDSVVDASGSITKALAEVDEAVSRTKDLIYLIATATEQQSKVVDEV 502

Query: 409 LKDSQDIASISEEFAATAEELTASAEEQSRI 439
            ++   +  +S+E          +A+E ++I
Sbjct: 503 NQNISSLNLLSQESIGVVRRTREAADEIAQI 533