Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 419 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  127 bits (318), Expect = 9e-34
 Identities = 101/321 (31%), Positives = 151/321 (47%), Gaps = 34/321 (10%)

Query: 159 MVNDLKKQIEYLNAELLKAKEDLVR-----AEETSEQVADAASQVATAAADQSAKLQDVS 213
           MV D  +  + +NA L +A +   R     A E  +++      VA+AAA   A    + 
Sbjct: 116 MVGDFGRYGDTVNAGL-EAMDRKTRGFHESASEMGDKIMHVVHSVASAAAQLQASASSLG 174

Query: 214 DQLEATSEITSAVTDAADDT---VTAAIEIEENSEMGVKKVENAIE-TMQSITNVIENLG 269
           D   +T + +  V DAA D    V+      E     +  V + +E T Q   N +   G
Sbjct: 175 DMARSTDDQSVRVADAARDASANVSGVAAATEEFSASITDVAHQVERTSQVAHNAVVTAG 234

Query: 270 KA---IQELGNESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKS 326
           KA   I  L   S +I EV  LI D+A QT LLALNA+IEAARAG+AGKGFAVVA E+K+
Sbjct: 235 KAESTINTLAQASARIGEVVGLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKT 294

Query: 327 LAEEIKKSVEDINRTINGVNRKVEATIDLGISGKDEVDKGVIAIDEVNGAFLKIKESVET 386
           LA++  ++ ++I   I G+       + L I G  E       I E++ A   I  ++  
Sbjct: 295 LAQQTARATDEIVGQIEGMRTATHEAV-LAIQGIGE------TIREISEAAQAIHHAISE 347

Query: 387 TSEKINSIKVNAERAVNNVETALKDSQDIASISEEFAATAEELTASAEEQSRIMNEIDDA 446
               +  I  N  RAV+ V    +    +A    E     EE+T +A             
Sbjct: 348 QRAVVGEIAGNVHRAVDGVRIVAEGIATVAGSVREATGAVEEITGAA------------- 394

Query: 447 IEEITKSSEQISKDVSKFKTE 467
             +++ +SE +S DV++F T+
Sbjct: 395 -NDLSCNSEGLSGDVARFITQ 414