Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 561 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  125 bits (313), Expect = 5e-33
 Identities = 107/380 (28%), Positives = 185/380 (48%), Gaps = 66/380 (17%)

Query: 97  EKLKKDENSLKT---YKKDVSNTFSELHTIFKS--LEQGDFTIRANTDR-----KYNALQ 146
           E+L +D+ +++     +KD     +    +FK   +E      R N +R     + N L 
Sbjct: 226 ERLARDDTAVEIPGHERKDEVGAMARAVLVFKDGMIESERLRARENAERIGKEERANTLA 285

Query: 147 VTTNNAIVNVSTMVNDLKKQIEYLNAELLKAKEDLVRAEETSEQVADAASQVATAAADQS 206
           V T++     S+++ND+    E   A  + A +    A+ T+EQ    ++ VA AA + S
Sbjct: 286 VLTHDFDTQASSVINDVA---EAAGAMQVTASQLTQAADSTAEQ----STAVAAAAQEAS 338

Query: 207 AKLQDVSDQLEATSEITSAVTDAADDTVTAAIEIEENSEMGVKKVENAIETMQSITNVIE 266
             +Q V+    A  E+TS++ + +        +I + S++  K V+ A  T    T ++ 
Sbjct: 339 TNVQTVA---AAAEELTSSIGEISR-------QIAQASQVSQKAVDQAAHT----TGIVG 384

Query: 267 NLGKAIQELGNESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKS 326
            L +A       +K+I EV  +I D+A QT LLALNA+IEAARAGDAGKGFAVVA E+KS
Sbjct: 385 GLEQA-------AKRIGEVVAMINDIASQTNLLALNATIEAARAGDAGKGFAVVAGEVKS 437

Query: 327 LAEEIKKSVEDINRTINGVNRKVEATIDLGISGKDEVDKGVIAIDEVNGAFLKIKESVET 386
           LA +  ++ +DI + I  V     A ++              AI+E           + T
Sbjct: 438 LANQTARATDDITQQIGSVQTATGAAVE--------------AINE-----------IAT 472

Query: 387 TSEKINSIKVNAERAVNNVETALKDSQDIASISEEFAATAEELTASAEEQSRIMNEIDDA 446
           T  +IN I  N   A+     A   +Q+IA   E+ A   +++T +    +R +++   +
Sbjct: 473 TIGEINEISANIAAAMEQQGAA---TQEIARNVEQAATGTDQVTRNIHGVNRTVDDTGHS 529

Query: 447 IEEITKSSEQISKDVSKFKT 466
            +E+  ++ ++  + +  +T
Sbjct: 530 AQEVLNAATRLRDESAAMQT 549