Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 684 a.a., methyl-accepting chemotaxis sensory transducer with Cache sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  127 bits (318), Expect = 2e-33
 Identities = 96/348 (27%), Positives = 166/348 (47%), Gaps = 57/348 (16%)

Query: 155 NVSTMVNDLKKQIEYLNAELLKAKEDLVRAEETSEQVADAASQVATAAAD----QSAKLQ 210
           ++ TMV  LK +I   + +   A E+  RA     +  +A +    A A+     +AKL+
Sbjct: 346 SLRTMVASLKGKIAEADEKTRMANEESERAARAGREAEEARAAAERARAEGMLQAAAKLE 405

Query: 211 DVSDQLEATSEITSAVTDAAD-----------DTVTA-------AIEIEENSEMGVKKVE 252
            V + + + SE  SA  + +            +T TA        +E+  N+    +  E
Sbjct: 406 SVVEIVTSASEELSAQVEQSSRGAESQSARVGETATAMEEMNATVLEVARNASQAAESAE 465

Query: 253 NAIETMQS----ITNVIENLGKA----------IQELGNESKKINEVTVLIKDVAEQTGL 298
           NA    +S    +T+V+ ++ +A          +Q LG +++ I +V  +I D+A+QT L
Sbjct: 466 NAKGRAESGATLVTDVVRSIAEAQTQALSLKADMQSLGTQAEGIGQVMNVITDIADQTNL 525

Query: 299 LALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEATIDLGIS 358
           LALNA+IEAARAGDAG+GFAVVA E++ LAE+   +  ++   I  +       ID    
Sbjct: 526 LALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMNATREVGDAIRNIQHGTRRNIDNVEQ 585

Query: 359 GKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKDSQDIASI 418
               +D      ++   A   I + V+ TSE++ S                     IA+ 
Sbjct: 586 AVQLIDNATGLANKSGDALHSIVQLVDVTSEQVRS---------------------IATA 624

Query: 419 SEEFAATAEELTASAEEQSRIMNEIDDAIEEITKSSEQISKDVSKFKT 466
           +E+ +AT+EE+  S E+ SRI  E  DA+ + + +  ++++   + K+
Sbjct: 625 AEQQSATSEEINHSIEDISRISGETSDAMRQSSVAVTELARQSQEMKS 672