Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 592 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  120 bits (300), Expect = 2e-31
 Identities = 75/271 (27%), Positives = 136/271 (50%), Gaps = 21/271 (7%)

Query: 188 SEQVADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDAADDTVTAAIEIEENSEMG 247
           SEQ++    Q    AA QS ++ + +  +E  +     V   A      A      ++ G
Sbjct: 325 SEQLSAQIGQSTQGAAVQSQRVAETAAAMEEMNATVLEVARNASQAADTAERARSKADTG 384

Query: 248 VKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLIKDVAEQTGLLALNASIEA 307
              V   +E + ++      L   + +LG ++  I ++  +I D+A+QT LLALNA+IEA
Sbjct: 385 AAVVGRVVEEIGTVERQAVALKDDMADLGRQADGIGKIMNVISDIADQTNLLALNAAIEA 444

Query: 308 ARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEATIDLGISGKDEVDKGV 367
           ARAGDAG+GFAVVA E++ LAE+  ++  ++   I G+ +     +       + V++ V
Sbjct: 445 ARAGDAGRGFAVVADEVRKLAEKTMQATREVGEAITGIQQGTRRNV-------EHVERAV 497

Query: 368 IAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKDSQDIASISEEFAATAE 427
            +I+E  G          ++ E +  I    E+A + V       + IA+ SE+ +A +E
Sbjct: 498 ASIEEATGL-------AGSSGEALREIVTLVEQATDQV-------RSIATASEQQSAASE 543

Query: 428 ELTASAEEQSRIMNEIDDAIEEITKSSEQIS 458
           E+  + +E +RI  E  D + +  ++ E+++
Sbjct: 544 EINRAVDEINRISGETTDGMHQSARAVEELA 574



 Score = 48.5 bits (114), Expect = 6e-10
 Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 49/248 (19%)

Query: 148 TTNNAIVNVSTMVNDLKKQIEYLNAELLKAKEDLVRAEETSEQ-----------VADAAS 196
           +T  A V  S  V +    +E +NA +L+   +  +A +T+E+           V     
Sbjct: 335 STQGAAVQ-SQRVAETAAAMEEMNATVLEVARNASQAADTAERARSKADTGAAVVGRVVE 393

Query: 197 QVATAAADQSAKLQDVSD---QLEATSEITSAVTDAADDT----VTAAIEIEENSEMG-- 247
           ++ T      A   D++D   Q +   +I + ++D AD T    + AAIE     + G  
Sbjct: 394 EIGTVERQAVALKDDMADLGRQADGIGKIMNVISDIADQTNLLALNAAIEAARAGDAGRG 453

Query: 248 -------VKKVENAIETMQSITNVIENLGKAIQELGNESKK-INEVTVLIKDVAEQTGLL 299
                  V+K+  A +TMQ+   V    G+AI  +   +++ +  V   +  + E TGL 
Sbjct: 454 FAVVADEVRKL--AEKTMQATREV----GEAITGIQQGTRRNVEHVERAVASIEEATGL- 506

Query: 300 ALNASIEAAR--------AGDAGKGFAVVASEIKSLAEEIKKSVEDINR----TINGVNR 347
              +S EA R        A D  +  A  + +  + +EEI ++V++INR    T +G+++
Sbjct: 507 -AGSSGEALREIVTLVEQATDQVRSIATASEQQSAASEEINRAVDEINRISGETTDGMHQ 565

Query: 348 KVEATIDL 355
              A  +L
Sbjct: 566 SARAVEEL 573