Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 663 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  117 bits (294), Expect = 9e-31
 Identities = 81/268 (30%), Positives = 131/268 (48%), Gaps = 10/268 (3%)

Query: 184 AEETSEQVADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDAADDTVT-------A 236
           A+  S QV D +  +A    D +   Q   D+++ T  +   V  AA D          A
Sbjct: 388 ADGISRQVVDGSESLAERVRDAAMGAQTQRDRVDETVSVMQDVNAAAVDATRLAGRAADA 447

Query: 237 AIEIEENSEMGVKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLIKDVAEQT 296
           A    + +  G  KV    E M+ +    E L   ++ELG ++  I  V  +I D+A+QT
Sbjct: 448 AERAVDEARAGSDKVRRMREAMRGVVERSEELRGGMRELGGQADSIGRVMAVIADIADQT 507

Query: 297 GLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEATIDLG 356
            LLALNA+IEAARAGDAG+GFAVVA E++ LAE+  ++  +++  I  +   V  +++  
Sbjct: 508 NLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMQATSEVHAAITAIQHGVRDSMNRV 567

Query: 357 ISGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKDSQDIA 416
            +    +D+      E + A  +I   V  T++++ SI   A+RA    + A + +  I 
Sbjct: 568 DASGGAIDETAQLAGESSEALERIVHLVGATTDEVGSI---ADRAGLQADQAARAAMAID 624

Query: 417 SISEEFAATAEELTASAEEQSRIMNEID 444
            I E   A AE +  +A     +  + D
Sbjct: 625 VIREVAEAMAEGMHEAASGVDGLRQQAD 652



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 3/126 (2%)

Query: 327 LAEEIKKSVEDINRTINGVNRKVEATIDLGISG---KDEVDKGVIAIDEVNGAFLKIKES 383
           LA+  +++     + ++G     E   D  +     +D VD+ V  + +VN A +     
Sbjct: 381 LAQAAREADGISRQVVDGSESLAERVRDAAMGAQTQRDRVDETVSVMQDVNAAAVDATRL 440

Query: 384 VETTSEKINSIKVNAERAVNNVETALKDSQDIASISEEFAATAEELTASAEEQSRIMNEI 443
               ++        A    + V    +  + +   SEE      EL   A+   R+M  I
Sbjct: 441 AGRAADAAERAVDEARAGSDKVRRMREAMRGVVERSEELRGGMRELGGQADSIGRVMAVI 500

Query: 444 DDAIEE 449
            D  ++
Sbjct: 501 ADIADQ 506