Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 550 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  126 bits (316), Expect = 2e-33
 Identities = 92/306 (30%), Positives = 153/306 (50%), Gaps = 39/306 (12%)

Query: 160 VNDLKKQIEYLNAELLKAKEDLVRAEETSEQVADAASQVATAAADQSAKLQDVS---DQL 216
           VN L + +  + AE      DL  A   S+++A    QV+  A  Q A++ + +   DQ+
Sbjct: 258 VNALVETMRRVAAEAAVIVGDLTDA---SQELAAQTQQVSAGAEVQRARMAETATAMDQM 314

Query: 217 EAT-SEITSAVTDAADDTVTAAIEIEENSEMGVKKVENAIETMQSITNVIENLGKAIQEL 275
            AT  EI    T AAD    A+    E ++ G + VENA +++  +  +   L   +Q L
Sbjct: 315 NATVMEIARNATLAAD----ASRSTREEAQKGAQVVENAGKSISRVHEIATRLRTDMQSL 370

Query: 276 GNESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSV 335
           G +++ I EV  +I ++A+QT LLALNA+IEAARAGDAG+GFAVVA E++ LAE+   + 
Sbjct: 371 GRDAESIGEVINVINEIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTTNAT 430

Query: 336 EDINRTINGVNRKVEATIDLGISGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIK 395
           +++   I+ +    +  ++   +    V       DE  GA  +I +  + T+ ++ SI 
Sbjct: 431 KEVETRISAIQTAAQRNVNNMDTATQAVADATGLADESGGALRRIVQFADNTAGQVQSI- 489

Query: 396 VNAERAVNNVETALKDSQDIASISEEFAATAEELTASAEEQSRIMNEIDDAIEEITKSSE 455
                                      AA +EE +A++++ SR + E++D   E  +  E
Sbjct: 490 ---------------------------AAASEEQSAASDQISRAVTEVNDVATESARGME 522

Query: 456 QISKDV 461
             S+ V
Sbjct: 523 AASEAV 528



 Score = 68.6 bits (166), Expect = 5e-16
 Identities = 56/301 (18%), Positives = 124/301 (41%), Gaps = 14/301 (4%)

Query: 170 LNAELLKAKEDLVRAEETSEQVADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDA 229
           L A + + KE L       ++  + A Q   A    +A+ Q+V+  +E    + +     
Sbjct: 216 LAAMVGRLKETLHDCSAKGDEARNQAEQARAAMQAATAREQEVNALVETMRRVAAEAAVI 275

Query: 230 ADDTVTAAIEIEENSEMGVKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLI 289
             D   A+ E+   ++      E     M      ++ +   + E+   +    + +   
Sbjct: 276 VGDLTDASQELAAQTQQVSAGAEVQRARMAETATAMDQMNATVMEIARNATLAADASRST 335

Query: 290 KDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKV 349
           ++ A++   +  NA    +R  +       +A+ +++  + + +  E I   IN +N   
Sbjct: 336 REEAQKGAQVVENAGKSISRVHE-------IATRLRTDMQSLGRDAESIGEVINVINEIA 388

Query: 350 EATIDLGISGKDEVDKG-------VIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAV 402
           + T  L ++   E  +         +  DEV     K   + +    +I++I+  A+R V
Sbjct: 389 DQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTTNATKEVETRISAIQTAAQRNV 448

Query: 403 NNVETALKDSQDIASISEEFAATAEELTASAEEQSRIMNEIDDAIEEITKSSEQISKDVS 462
           NN++TA +   D   +++E       +   A+  +  +  I  A EE + +S+QIS+ V+
Sbjct: 449 NNMDTATQAVADATGLADESGGALRRIVQFADNTAGQVQSIAAASEEQSAASDQISRAVT 508

Query: 463 K 463
           +
Sbjct: 509 E 509