Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 673 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  124 bits (312), Expect = 7e-33
 Identities = 103/343 (30%), Positives = 163/343 (47%), Gaps = 35/343 (10%)

Query: 129 QGDFTIRANTDRKYNALQVTTNNAIVNVSTMVNDLKKQIEYLNAELLKAKEDLVR----- 183
           Q DFT +   + +Y   +  T            ++++ I  +    L+A E   R     
Sbjct: 337 QLDFTRQTGGETRYFHSRAATVRKPDGTLVGYMEIRQDITAVKRGELEALERSERIAGVA 396

Query: 184 --AEETSEQVADAASQ----VATAAADQSAKLQDVSDQLEATSEITSAVTDAA---DDTV 234
             A+  +  VADAASQ    V  AA     +LQ  S+   A  E+ + V + A    DT 
Sbjct: 397 RDADAIATTVADAASQLSDRVGEAARGADRQLQRSSESATAMDEMAATVREVARNASDTN 456

Query: 235 TAAIEIEENSEMGVKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLIKDVAE 294
               E+ E +  G   VE     ++ + +    L   +++LG ++  I  V  +I D+A+
Sbjct: 457 RTTAEMSERARQGADIVEKVAAAIEGLGSHSRELRSEMEKLGTQASDIGNVLGVISDIAD 516

Query: 295 QTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGV----NRKVE 350
           QT LLALNA+IEAARAGDAG+GFAVVA E++ LAE+   +  ++   I G+     R  E
Sbjct: 517 QTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMNATREVEAAIGGIQQSARRSAE 576

Query: 351 ATIDLGISGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALK 410
           AT D+ + G   V       +E  G   +I  +V+  S+++NSI   AE+      T  +
Sbjct: 577 AT-DVAVRG---VTDSQALANEAGGMLQEIVHAVQQASDQVNSIATAAEQ---QAATGDE 629

Query: 411 DSQDIASISEEFAATA----------EELTASAEEQSRIMNEI 443
            ++ IA ++E   +TA           EL+A A    R+M+ +
Sbjct: 630 LNRIIAEVNEISGSTAMRMSEAETAIAELSAQAAALRRLMDSM 672