Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 602 a.a., methyl-accepting chemotaxis sensory transducer with Cache sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  123 bits (309), Expect = 1e-32
 Identities = 92/346 (26%), Positives = 163/346 (47%), Gaps = 22/346 (6%)

Query: 119 ELHTIFKSLEQGDFTIRANTDRKYNALQVTTNNAIVNVSTMVNDLKKQIEYLNAE---LL 175
           E+  +  +L+    T+R N +R  +A Q        + S    +  +Q     A    +L
Sbjct: 260 EVSALQSALDVMVTTLRGNIERM-SAQQDEARRLAESASEAARNADEQARAAMASKEGML 318

Query: 176 KAKEDLVR-AEETSEQVADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDAADDTV 234
           +A   L R  E+      + AS+ AT +    ++   V++   A  ++ ++V D A    
Sbjct: 319 EAAARLQRMTEDLGVSARELASRSATLSEGSRSQTTRVAETATAMEQMNASVMDVARSAA 378

Query: 235 TAAIEIE---ENSEMGVKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLIKD 291
            AA E E   E +  G + V   ++ M  +  + E+L + ++ LG +S+ I  V  +I D
Sbjct: 379 DAARETEASRERARQGAEAVTATMDAMGELRQLAESLHENMRRLGGQSEAIGTVMSVIND 438

Query: 292 VAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEA 351
           +A+QT LLALNA+IEAARAGDAG+GFAVVA E++ LAE+   +  ++  TI G+    EA
Sbjct: 439 IADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMNATREVGETIKGIQSLTEA 498

Query: 352 TIDLGISGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKD 411
                            ++D+   A    +     + E +  I   A R    V+     
Sbjct: 499 --------------NARSMDDSLRAMELAERRSADSGEVLRGILDMAVRVTGQVQAIAAA 544

Query: 412 SQDIASISEEFAATAEELTASAEEQSRIMNEIDDAIEEITKSSEQI 457
           ++  ++ SE+   +  ++   A +  R++ E D  I ++ + +EQ+
Sbjct: 545 AEQQSAASEQITRSLAQVDGIARDNGRLVTEEDKEIRDLGRMAEQL 590