Pairwise Alignments
Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2
Subject, 582 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Desulfovibrio vulgaris Miyazaki F
Score = 125 bits (315), Expect = 3e-33
Identities = 92/331 (27%), Positives = 163/331 (49%), Gaps = 33/331 (9%)
Query: 136 ANTDRKYNALQVTTNNAIVNVSTMVNDLKKQIEYLNAE-LLKAKEDLVRAEET----SEQ 190
A D K + A+ + + +KQ E E +++A + L E SE+
Sbjct: 261 AEADEKTVLAEAKEREAMA-ATAAAEEARKQAENAKREGMIQAAQKLEGVVEVVSSASEE 319
Query: 191 VADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDAADDTVTAAIEIEE---NSEMG 247
++ Q A +QS ++ + + +E E+ ++V + A + TAA E +E G
Sbjct: 320 LSAQIEQSDRGAEEQSKRVAETATSME---EMNASVLEVARNAGTAATSSENARNKAESG 376
Query: 248 VKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLIKDVAEQTGLLALNASIEA 307
V N + + + +L + +++LG +++ I ++ +I D+A+QT LLALNA+IEA
Sbjct: 377 ADIVNNVVREISQVQQQSMDLKRDMEDLGRQAEAIGQIMNVISDIADQTNLLALNAAIEA 436
Query: 308 ARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEATIDLGISGKDEVDKGV 367
ARAGDAG+GFAVVA E++ LAE+ ++ ++ I G+ + + + D VD+ V
Sbjct: 437 ARAGDAGRGFAVVADEVRKLAEKTMQATSEVGSAIRGIQQGAQKNM-------DNVDRSV 489
Query: 368 IAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKDSQDIASISEEFAATAE 427
AI E T+ + + V V++A + IA+ SE+ +A +E
Sbjct: 490 RAI--------------EDTTRLAQESGASLKEIVALVDSATDQVRGIATASEQQSAASE 535
Query: 428 ELTASAEEQSRIMNEIDDAIEEITKSSEQIS 458
E+ + E+ S I E A+ E K+ ++S
Sbjct: 536 EINRAVEQVSTISAETAQAMREAAKAVSELS 566
Score = 62.0 bits (149), Expect = 5e-14
Identities = 73/362 (20%), Positives = 146/362 (40%), Gaps = 48/362 (13%)
Query: 144 ALQVTTNNAIVNVSTMVNDLKKQIEYL---NAELLKAKEDL-VRAEETSEQVADAASQVA 199
AL + A+ + + +N L + YL + E+ ++ R+E V A +
Sbjct: 194 ALLIGVGAAVFLIRSTLNQLGEDPGYLQGVSTEIAAGNLNVNFRSERPLSGVYQAMQAMV 253
Query: 200 TAAADQSAKLQDVSDQLEATSEITSAVTDAADDTVTAAIEIEENSEMGVKKVENAIETMQ 259
+ A+ + + EA A T AA++ A EN+ K E I+ Q
Sbjct: 254 GTLKGKIAEADEKTVLAEAKEREAMAATAAAEEARKQA----ENA-----KREGMIQAAQ 304
Query: 260 SITNVIENLGKAIQELG-----------NESKKI-------NEVTVLIKDVAEQTGLLAL 301
+ V+E + A +EL +SK++ E+ + +VA G A
Sbjct: 305 KLEGVVEVVSSASEELSAQIEQSDRGAEEQSKRVAETATSMEEMNASVLEVARNAGTAAT 364
Query: 302 ---NASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEATIDLG-- 356
NA +A D S+++ + ++K+ +ED+ R + + + D+
Sbjct: 365 SSENARNKAESGADIVNNVVREISQVQQQSMDLKRDMEDLGRQAEAIGQIMNVISDIADQ 424
Query: 357 ---------ISGKDEVDKG---VIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNN 404
I D G + DEV K ++ I I+ A++ ++N
Sbjct: 425 TNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMQATSEVGSAIRGIQQGAQKNMDN 484
Query: 405 VETALKDSQDIASISEEFAATAEELTASAEEQSRIMNEIDDAIEEITKSSEQISKDVSKF 464
V+ +++ +D +++E A+ +E+ A + + + I A E+ + +SE+I++ V +
Sbjct: 485 VDRSVRAIEDTTRLAQESGASLKEIVALVDSATDQVRGIATASEQQSAASEEINRAVEQV 544
Query: 465 KT 466
T
Sbjct: 545 ST 546
Score = 43.1 bits (100), Expect = 2e-08
Identities = 50/278 (17%), Positives = 114/278 (41%), Gaps = 26/278 (9%)
Query: 86 EEMFKTVISDFEKLKKDENSLKTYKKDVSNTFSELHTIFKSLEQGDFTIRANTDRKYNAL 145
E + + V S E+L ++ S +E T + + + N +
Sbjct: 307 EGVVEVVSSASEELSAQIEQSDRGAEEQSKRVAETATSMEEMNASVLEVARNAGTAATSS 366
Query: 146 QVTTNNAIVNVSTMVNDLKK--QIEYLNAELLKAKEDLVRAEETSEQV-------ADAAS 196
+ N A + N +++ Q++ + +L + EDL R E Q+ AD +
Sbjct: 367 ENARNKAESGADIVNNVVREISQVQQQSMDLKRDMEDLGRQAEAIGQIMNVISDIADQTN 426
Query: 197 QVATAAADQSAKLQD-------VSDQLEATSEITSAVTDAADDTVTAAIEIEENSEMGVK 249
+A AA ++A+ D V+D++ +E T T + I++ ++ +
Sbjct: 427 LLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMQATSEVGSAIRG---IQQGAQKNMD 483
Query: 250 KVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLIKDVAEQTGLLA--LNASIE- 306
V+ ++ ++ T + + G +++E+ + I +EQ + +N ++E
Sbjct: 484 NVDRSVRAIEDTTRLAQESGASLKEIVALVDSATDQVRGIATASEQQSAASEEINRAVEQ 543
Query: 307 ----AARAGDAGKGFAVVASEIKSLAEEIKKSVEDINR 340
+A A + A SE+ + A+ +++ VE++ +
Sbjct: 544 VSTISAETAQAMREAAKAVSELSNQAQVLRRLVEELKQ 581