Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 769 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  126 bits (317), Expect = 2e-33
 Identities = 84/297 (28%), Positives = 147/297 (49%), Gaps = 35/297 (11%)

Query: 183 RAEETSEQVADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDAADDTVTAAIEIEE 242
           R    S +  D ASQ+ATA+   SA+++  +   +   E T+    A +    + +E+  
Sbjct: 486 RIARASAEADDVASQLATASEQLSAQIEQSARGSDIQRERTAEAATAMEQMNASVLEVAR 545

Query: 243 NS--------------EMGVKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVL 288
           N+              + G + V+ ++ T+Q    +  +L   + ELG +++ I ++  +
Sbjct: 546 NAGGAAEMAEKAKIRAQEGAEVVDGSVRTIQHAHELASHLKSDMAELGTQAQGIGQIMNV 605

Query: 289 IKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRK 348
           I D+A+QT LLALNA+IEAARAGDAG+GFAVVA E++ LAE+   +  ++   I G+   
Sbjct: 606 IADIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMTATNEVGSAIRGIQES 665

Query: 349 VEATIDLGISGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETA 408
               I          +K   AI+E  G     + S +   E +  ++  A++        
Sbjct: 666 ARKNI-------ANTEKATAAIEEGTG---MARRSGDVLREIVGLVESTADQV------- 708

Query: 409 LKDSQDIASISEEFAATAEELTASAEEQSRIMNEIDDAIEEITKSSEQISKDVSKFK 465
               + IA+ SE+ +A +EE+  S +E +RI  E  +A+    ++ E +S+  S  K
Sbjct: 709 ----RSIATASEQQSAASEEINRSTDEITRIAAETAEAMRHSAQAVEDVSRLASDLK 761