Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 676 a.a., methyl-accepting chemotaxis sensory transducer from Marinobacter adhaerens HP15

 Score =  128 bits (321), Expect = 7e-34
 Identities = 89/334 (26%), Positives = 161/334 (48%), Gaps = 15/334 (4%)

Query: 115 NTFSELHTIFKSLEQGDFTIRANTDRKYNALQVTTNNAIVNVSTMVNDLKKQIEYLNAEL 174
           N FSE     +++  GD T   +   +    ++TT     N++  + +L + +    A++
Sbjct: 354 NRFSEAA---RNVAAGDMTTHISLRNRDELGELTTE--FNNMTDRIAELIRSVSRTTADV 408

Query: 175 LKAKEDLVRAEETSEQVADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDAADDTV 234
                     ++ + +V D A+  + A A Q  +   +++ +    E    VT++A    
Sbjct: 409 ----------DQQATRVNDTAAANSEAVARQMEESGQINEAMNQMVEAVHEVTESAHRVA 458

Query: 235 TAAIEIEENSEMGVKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLIKDVAE 294
            +A   E+++E G   V + +ET+  +   I    + I  +  +S  I++V V IK +AE
Sbjct: 459 DSASNAEQDTETGRGVVADTVETINKLAGEISGAVEVINRVSKDSDNISQVLVEIKAIAE 518

Query: 295 QTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEATID 354
           QT LLALNA+IEAARAG+ G+GFAVVA E++SL++   KS E+I   I+ +   V+  + 
Sbjct: 519 QTNLLALNAAIEAARAGEQGRGFAVVADEVRSLSQRTHKSTEEIEGMISRLQSGVKDAVS 578

Query: 355 LGISGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKDSQD 414
              + +D  +  V    EV  A  +I + +    +  + I   AE      +    + + 
Sbjct: 579 AMTNSRDVTEATVQKSGEVTEALDRIAKGISVIVDMSHQIAQAAEEQSAVAKNVNSNVEQ 638

Query: 415 IASISEEFAATAEELTASAEEQSRIMNEIDDAIE 448
           I  +  + AA AEE   S+ E S++   +   +E
Sbjct: 639 IGELGHKTAANAEETLGSSREMSQLTASLQRLVE 672



 Score = 38.5 bits (88), Expect = 7e-07
 Identities = 36/171 (21%), Positives = 75/171 (43%), Gaps = 17/171 (9%)

Query: 300 ALNASIEAAR---AGDAGKGFAV--------VASEIKSLAEEIKKSVEDINRTINGVNRK 348
           A+N   EAAR   AGD     ++        + +E  ++ + I + +  ++RT   V+++
Sbjct: 352 AINRFSEAARNVAAGDMTTHISLRNRDELGELTTEFNNMTDRIAELIRSVSRTTADVDQQ 411

Query: 349 VEATIDLGISGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETA 408
                D   +  + V + +    ++N A  ++ E+V   +E  + +  +A  A  + ET 
Sbjct: 412 ATRVNDTAAANSEAVARQMEESGQINEAMNQMVEAVHEVTESAHRVADSASNAEQDTETG 471

Query: 409 LKDSQDIASISEEFAATAEELTASAEEQSRIMNEIDD---AIEEITKSSEQ 456
                 +A   E     A E++ + E  +R+  + D+    + EI   +EQ
Sbjct: 472 ---RGVVADTVETINKLAGEISGAVEVINRVSKDSDNISQVLVEIKAIAEQ 519



 Score = 35.0 bits (79), Expect = 8e-06
 Identities = 23/115 (20%), Positives = 53/115 (46%), Gaps = 4/115 (3%)

Query: 352 TIDLGISGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKD 411
           ++   I+   E  + V A D      L+ ++ +   + + N++       + +V     D
Sbjct: 348 SVRTAINRFSEAARNVAAGDMTTHISLRNRDELGELTTEFNNMTDRIAELIRSVSRTTAD 407

Query: 412 -SQDIASISEEFAATAEELTASAEEQSRI---MNEIDDAIEEITKSSEQISKDVS 462
             Q    +++  AA +E +    EE  +I   MN++ +A+ E+T+S+ +++   S
Sbjct: 408 VDQQATRVNDTAAANSEAVARQMEESGQINEAMNQMVEAVHEVTESAHRVADSAS 462