Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 630 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  124 bits (311), Expect = 9e-33
 Identities = 91/364 (25%), Positives = 176/364 (48%), Gaps = 45/364 (12%)

Query: 111 KDVSNTFSELHTIFKSLEQGDFTIRANTDRKYNALQVTT---NNAIVNVSTMVN---DLK 164
           KD+      L+ I +    GD T+R +T   ++ + +     N  +  +  M++   ++ 
Sbjct: 302 KDLERVALALNDIAEG--DGDLTVRIHTANSHDEIGILASGFNRFVERLHGMISRMHNIA 359

Query: 165 KQIEYLNAELLKAKEDLVRAEETSEQVA---DAASQVATAAADQSAKLQDVSDQLEATSE 221
            Q+EY      +AK     A + S+++    D  + VATA  + ++  ++++   E T++
Sbjct: 360 GQLEY------QAKGSSASAADNSQRIEVQQDEVTMVATAVTEMASATEEIASNAEHTAQ 413

Query: 222 ITSAVTDAADDTVTAAIEIEENSEMGVKKVENAIETMQSITNVIENLGKAIQELGNESKK 281
                      T   A+ +   S  G K+V  + ++++++ N ++  G+ I EL   S+K
Sbjct: 414 -----------TAQNAVSL---SNHGQKQVMQSQQSIRNLANEVDTAGRIISELNEHSQK 459

Query: 282 INEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRT 341
           IN + + I  +AEQT LLALNA+IEAARAG+ G+GFAVVA E++ L++    S ++I   
Sbjct: 460 INSILLTISGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHSSTQEIQAM 519

Query: 342 INGVNRKVEATIDLGISGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERA 401
           I  + +     +       D  +  V   +  + + L+I +++   S+  + I   AE  
Sbjct: 520 IETLQQTAGKAVKSMTQSHDMAETSVADANSASESLLQISKAINEISDMASQIATAAEEQ 579

Query: 402 VNNVETALKDSQDIASISEEFAATAEELTASAEEQSRIMNEIDDAIEEITKSSEQISKDV 461
            +      ++++ I  +SE  +  A+    SA  QS          +E+   +  + ++V
Sbjct: 580 TSVTSEINRNTESIREVSENLSIEAQ----SAMVQS----------QELAHLAASLQQEV 625

Query: 462 SKFK 465
           S+FK
Sbjct: 626 SRFK 629