Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 801 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  121 bits (303), Expect = 1e-31
 Identities = 82/318 (25%), Positives = 160/318 (50%), Gaps = 29/318 (9%)

Query: 160 VNDLKKQIEYLNAELLKAKEDLVRAEETSEQVADAASQVATAAAD-------QSAKLQDV 212
           +  L++Q + + A+     E    A+  +  +  AA+++A    +       Q A+  + 
Sbjct: 496 ITALRQQQQRIEAQRDAMAEVATEADGIARDLNAAANELAAQVREASNGSDVQRARTTET 555

Query: 213 SDQLEATSEITSAVTDAADDTVTAAIEIEENSEMGVKKVENAIETMQSITNVIENLGKAI 272
           +  +E  +     V  +A      A    + ++ G + V + +E ++++  +   L +++
Sbjct: 556 ATAMEQMNATVLEVAQSAGHAAENAENARKKADEGARLVGDVVEAIEAVREMALELQQSM 615

Query: 273 QELGNESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIK 332
           Q L  E++ I  +  +I+D+A+QT LLALNA+IEAARAGDAG+GFAVVA E++ LAE+  
Sbjct: 616 QGLATEAEGIGHIMQVIEDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTM 675

Query: 333 KSVEDINRTI----NGVNRKVEATIDLGISGKDEVDKGVIAIDEVNGAFLKIKESVETTS 388
            +  ++ + I     G    +EAT +              A++ V  + +    S E  S
Sbjct: 676 NATREVGQAIRNIQTGARNSMEATSN--------------AVEAVVASNMLTTRSGEALS 721

Query: 389 EKINSIKVNAERAVNNVETALKDSQDIASISEEFAATAEELTASAEEQSRIMNEIDDAIE 448
             +  +   A++ V  + TA   S+  ++ SE+ +   EE+TA AE  ++ MN   DA++
Sbjct: 722 SIVKMVDDTADQ-VRGIATA---SEQQSAASEQISRATEEITAIAEVTAQTMNRSSDAVQ 777

Query: 449 EITKSSEQISKDVSKFKT 466
           ++T+ +  +   + + +T
Sbjct: 778 QLTRLAGDLGGLIEQIRT 795



 Score = 25.8 bits (55), Expect = 0.006
 Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 3/103 (2%)

Query: 185 EETSEQV-ADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDAADDTVTAAIEIEEN 243
           E TS  V A  AS + T  + ++  L  +   ++ T++    +  A++    A+ +I   
Sbjct: 697 EATSNAVEAVVASNMLTTRSGEA--LSSIVKMVDDTADQVRGIATASEQQSAASEQISRA 754

Query: 244 SEMGVKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVT 286
           +E      E   +TM   ++ ++ L +   +LG   ++I   T
Sbjct: 755 TEEITAIAEVTAQTMNRSSDAVQQLTRLAGDLGGLIEQIRTGT 797