Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 667 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  119 bits (299), Expect = 2e-31
 Identities = 84/329 (25%), Positives = 176/329 (53%), Gaps = 57/329 (17%)

Query: 155 NVSTMVNDLKKQIEYLNAELLKAKEDLVRAEETSEQVADAASQVATAAADQSAKLQDVSD 214
           +VSTM ++L++ I  L A +           ++ EQ A  A ++A    +++  L   +D
Sbjct: 377 SVSTMSSELRQLISALQASV-----------QSIEQQASKAQRIAKQNGEEAQALMQQTD 425

Query: 215 QLE-ATSEITSAVTDAAD---DTVTAAIEIEENSEMGVKKVENAIETMQSITNVIENLGK 270
           Q+  A  E+++++ D A+   D    + +++  ++ G ++    ++ +  ++  + +  +
Sbjct: 426 QIATAIEEMSTSIRDVANHAQDGANQSQQVDLAAKEGQQQQTQVVQDLLKLSQQLSSSHQ 485

Query: 271 AIQELGNESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEE 330
           A++++  ES+ I++VT +I  +AEQT LLALNA+IEAARAG+ G+GFAVVA E+++LA+ 
Sbjct: 486 AVEKVSQESEAISKVTEVINSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQR 545

Query: 331 IKKSVEDINRTINGVNRKVEATI-------DLGISGKDEVDKGVIAIDEVNGAFLKIKES 383
            + S+ +I++TI+ +  +V+ T         LGI+  ++ ++    ++E+          
Sbjct: 546 TQSSILEISQTIDKLQSQVKTTTSQMAQSHQLGIASANQGEETGKQLEEI---------- 595

Query: 384 VETTSEKINSIKVNAERAVNNVETALKDSQDIASISEEFAATAEELTASAEEQSRIMNEI 443
               + +I  + ++              S++IAS +E+ ++ A+E+T +  + S + NE 
Sbjct: 596 ----TRRIGELAIS--------------SRNIASATEQQSSVAQEITHNLHQISELANEG 637

Query: 444 DDAIEEITKSSEQIS-------KDVSKFK 465
           +    E   S+  +S       + +S+FK
Sbjct: 638 EHRAAETVNSANDLSSLAVALKQQISQFK 666