Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 630 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  127 bits (320), Expect = 8e-34
 Identities = 87/346 (25%), Positives = 167/346 (48%), Gaps = 31/346 (8%)

Query: 111 KDVSNTFSELHTIFKSLEQGDFTIRANTDRKYNALQVTT---NNAIVNVSTMVNDLKK-- 165
           KD+      L+ I +    GD T+R +T   ++ + +     N  +  +  M++ + K  
Sbjct: 302 KDLERVALALNDIAEG--DGDLTVRIHTANSHDEIGILASGFNRFVERLHGMISRMHKIA 359

Query: 166 -QIEYLNAELLKAKEDLVRAEETSEQVA---DAASQVATAAADQSAKLQDVSDQLEATSE 221
            Q+EY      +A+     A + S+++A   D  + VATA  + ++  ++++   E T++
Sbjct: 360 GQLEY------QAQGSSASATDNSQRIAVQQDEVTMVATAVTEMASATEEIASNAEHTAQ 413

Query: 222 ITSAVTDAADDTVTAAIEIEENSEMGVKKVENAIETMQSITNVIENLGKAIQELGNESKK 281
                   A D V         S  G K+V  + ++++++ N +E  G+ I EL   S+K
Sbjct: 414 -------TAQDAVGL-------SNHGQKQVMQSQQSIRNLANEVETAGRIISELNEHSQK 459

Query: 282 INEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRT 341
           IN + + I  +AEQT LLALNA+IEAARAG+ G+GFAVVA E++ L++    S ++I   
Sbjct: 460 INSILLTISGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHSSTQEIQAM 519

Query: 342 INGVNRKVEATIDLGISGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERA 401
           I  + +     +       D  +  V   +  + + L+I +++   S+  + I   AE  
Sbjct: 520 IETLQQTAGKAVKSMTQSHDMAETSVADANSASESLLQISKAINEISDMASQIATAAEEQ 579

Query: 402 VNNVETALKDSQDIASISEEFAATAEELTASAEEQSRIMNEIDDAI 447
            +      ++++ I  +SE  +  A+     A+E + +   +   +
Sbjct: 580 TSVTSEINRNTESIREVSENLSIEAQSSMVQAQELAHLAASLQQEV 625