Pairwise Alignments

Query, 154 a.a., chemotaxis protein CheD from Methanococcus maripaludis S2

Subject, 210 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 72.4 bits (176), Expect = 4e-18
 Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 7/150 (4%)

Query: 2   VLKVKMGDIGVAKSPESIETLLGSCVAIILYDRGKKIGGVAHVMLP-----KSRNSSEKN 56
           V +V  G+   +   E I T LGSCVA  ++D    IGG+ H +LP     +  +     
Sbjct: 27  VARVDPGEYYYSCQDEFIYTRLGSCVAACIWDPLMGIGGLNHFLLPEKVLHEDWHQLTSY 86

Query: 57  PGKYANTAIPELINRMAKLGARKDKLTTKLAGGAAMFKCNSNTIDVGKKNIEASREEVKK 116
             +Y N A+ +LIN +   G  K +L  K+ GGA + +   + ++VG+ NI   RE +  
Sbjct: 87  SCRYGNWAMEQLINGILSAGGLKSRLKAKIFGGATLGRI--SVLNVGQSNIAFVREYLAL 144

Query: 117 MGLRIASEDLGGDTGRTITLSLKDGSVLVR 146
            G+ + SEDLGG   R +    + G V ++
Sbjct: 145 EGIPVMSEDLGGPWPRKVLFHPQSGRVRLK 174