Pairwise Alignments

Query, 154 a.a., chemotaxis protein CheD from Methanococcus maripaludis S2

Subject, 176 a.a., CheD, stimulates methylation of MCP proteins (NCBI) from Rhodospirillum rubrum S1H

 Score = 79.7 bits (195), Expect = 2e-20
 Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 2/147 (1%)

Query: 8   GDIGVAKSPESIETLLGSCVAIILYDRGKKIGGVAHVMLPKSRNSSEKNPGKYANTAIPE 67
           G +    +P  I T+LGSCVA+ L DR  +  G+ H +LP   N + ++  +Y + A+  
Sbjct: 13  GTLYCGAAPAVISTVLGSCVAVCLIDRHNRAAGMNHFVLP--HNPAGEDSLRYGDVALDR 70

Query: 68  LINRMAKLGARKDKLTTKLAGGAAMFKCNSNTIDVGKKNIEASREEVKKMGLRIASEDLG 127
           L  RM +LG     L  K+ GGAA+    +    VG KN++ + E +   G+   +   G
Sbjct: 71  LHARMGELGCETKDLRAKVFGGAAVLPFGATGDSVGTKNVKIAIEWLHAQGIPTLARRTG 130

Query: 128 GDTGRTITLSLKDGSVLVRTGSELKTI 154
           G+ G  I      G VLVRT     TI
Sbjct: 131 GENGLLIRFYTATGRVLVRTIQSAITI 157