Pairwise Alignments

Query, 154 a.a., chemotaxis protein CheD from Methanococcus maripaludis S2

Subject, 184 a.a., putative chemoreceptor glutamine deamidase CheD from Phaeobacter inhibens DSM 17395

 Score = 72.4 bits (176), Expect = 4e-18
 Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 5/139 (3%)

Query: 5   VKMGDIGVAKSPESI-ETLLGSCVAIILYDRGKKIGGVAHVMLPKSRNSSEKNPGKYANT 63
           V  G+  V+ SP  +  T+LGSC+A  +YD    +GG+ H +L  S  S   N  +Y   
Sbjct: 12  VLQGEYRVSTSPTVVFSTVLGSCIAACIYDDQVGVGGMNHFLLASSTASDSVN-ARYGIH 70

Query: 64  AIPELINRMAKLGARKDKLTTKLAGGAAMFKCNSNTIDVGKKNIEASREEVKKMGLRIAS 123
           A+  LIN + K GAR++ L  K+ GGA   K ++N  D+G  N +  +  ++   + + S
Sbjct: 71  AMELLINGIMKKGARRENLKAKVFGGA---KMSANLSDIGASNADFVQRFLRDESIAVVS 127

Query: 124 EDLGGDTGRTITLSLKDGS 142
             +GG + R +      G+
Sbjct: 128 SSVGGTSARRVRFHAVSGA 146