Pairwise Alignments

Query, 154 a.a., chemotaxis protein CheD from Methanococcus maripaludis S2

Subject, 199 a.a., chemotaxis protein CheD, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 79.3 bits (194), Expect = 3e-20
 Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 8/150 (5%)

Query: 2   VLKVKMGDIGVAKSPESIETLLGSCVAIILYDRGKKIGGVAHVMLPKSRNS----SEKNP 57
           V+ +  G+  V    E I+TLLGSCVA+ LYD   ++ G+ H +L   R       +   
Sbjct: 8   VVMIGPGEHYVTAKNEVIKTLLGSCVAVCLYDPKAQVIGMNHFLLAADRRKFTHFLDSRA 67

Query: 58  GKYANTAIPELINRMAKLGARKDKLTTKLAGGAAMFK-CNSNTI---DVGKKNIEASREE 113
           G Y   A+  LIN M K GA++  L +K+ GGA +   C  N +   D+G  NI+  R  
Sbjct: 68  GYYGVHAMEILINAMLKRGAQRKYLQSKIFGGANVLSLCADNILNHYDIGGMNIDFVRHF 127

Query: 114 VKKMGLRIASEDLGGDTGRTITLSLKDGSV 143
           +++  + I SED+GG  GR I     D SV
Sbjct: 128 LQRERIPIISEDIGGHCGRVIYFDPTDYSV 157