Pairwise Alignments

Query, 920 a.a., chemotaxis protein CheA from Methanococcus maripaludis S2

Subject, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  322 bits (824), Expect = 8e-92
 Identities = 165/407 (40%), Positives = 267/407 (65%), Gaps = 8/407 (1%)

Query: 517 LKDNTKIKNTVDATSKKQAENSSSKKSQTVRVNIEKLDKLMNLVGEVVINRANFTQIATK 576
           +KD+ + +    A   K+A+  S     TVRV+   LD +MN+VGE+V+ R     +   
Sbjct: 374 VKDSDESREVAAAGGAKKAQTES-----TVRVDTSTLDTIMNMVGELVLVRNRLLSLGLN 428

Query: 577 YDLKELHNAVGRLNMLATELQEEVMGMRMIPVAFVFNRFPRTVRDTAKALDKEIDFEIEG 636
            + +E+  AV  L+++  +LQ  VM  RM P+  VF RFPR VRD A++L+KEID E+ G
Sbjct: 429 SNDEEMSKAVANLDVVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRG 488

Query: 637 SDIELDRTVLDELAEPLTHLIRNSLDHGIEHADERIKLGKPEKGILKLIATRQRDRVNII 696
            + +LD+ +++ LA+PL HL+RNS+DHGIE  DER K GK   G + L A+++ D + + 
Sbjct: 489 EETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQLA 548

Query: 697 IRDDGKGIDPEAMRKKAFEKGLYSKEEAEKLTDNEAVNVIFHPGFSTAEVVSDVSGRGVG 756
           I DDG G+DP+ +R  A ++G+  ++ A +LT+ E  N+IF PGFS+ E ++D+SGRGVG
Sbjct: 549 IVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNLIFMPGFSSKEKITDISGRGVG 608

Query: 757 MDVVRSKIESLGGSVTVNSEVGKGTEITLHLPLTMAIIQTLLIRLNEHIYALPLTSVLDV 816
           MDVV++ I +L GS+ ++S +GKGT+IT+ +PLT+AI+ TL++ +  H +ALPL SV ++
Sbjct: 609 MDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTLMVGVAGHPFALPLASVNEI 668

Query: 817 ISVEKEQIKNLEGQEAIIYRNHILPVIWLKDALNTSGFS---DSDDLYVVVVEKNKGKVG 873
             ++  +   ++GQ  II R   +P+ +L++ L              +VV+V+    +VG
Sbjct: 669 FHLDLRRTNVVDGQLTIIVREKSIPLFYLQNWLAPKKGKVQLRQGHGHVVIVQIGSQRVG 728

Query: 874 MILDEVIGRDEIVVKPLTGILKNINGLAGATILGDGRVALILDLNNI 920
           +++D +IG++E+V+KPL  +L+   G++GATI  DG +ALILD+ ++
Sbjct: 729 LVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIALILDVPDL 775



 Score = 82.0 bits (201), Expect = 1e-19
 Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 3/152 (1%)

Query: 11  FMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTLGFEHISSLTHHME 70
           F+ EA E L+ L++ +VELEN PED + ++N IFR  HT+KG A  L    +    H  E
Sbjct: 13  FLVEAGEILELLSEQLVELENNPEDRD-LLNAIFRGFHTVKGGAGFLALSELVETCHGAE 71

Query: 71  DILDYIRDGKIKVNPEIVDLLFKCLDALETMVSEVSDGEDTTSVDVDSLVEVIKSVKEKY 130
           ++ D +R+G+  V+P ++D + K LD +      V + E     D + L E+ +    K 
Sbjct: 72  NVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELLDELHR--LSKP 129

Query: 131 LSGENSKEDSLDYSDPNEVAKKQVEEKTVNNI 162
            S +  +     + +P E   +++ E+ V ++
Sbjct: 130 ASEDEDEAAEAHFDEPEEELVEEIIEEVVEDV 161