Pairwise Alignments

Query, 920 a.a., chemotaxis protein CheA from Methanococcus maripaludis S2

Subject, 758 a.a., CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt from Pseudomonas syringae pv. syringae B728a

 Score =  313 bits (803), Expect = 2e-89
 Identities = 154/380 (40%), Positives = 253/380 (66%), Gaps = 1/380 (0%)

Query: 539 SSKKSQTVRVNIEKLDKLMNLVGEVVINRANFTQIATKYDLKELHNAVGRLNMLATELQE 598
           +++   TVRV+  +LD++MN+VGE+V+ R    ++      + +  AV  L+++  +LQ 
Sbjct: 367 ATEAETTVRVDTARLDEIMNMVGELVLVRNRLVRLGLNSGDEAMSKAVSNLDVVTADLQT 426

Query: 599 EVMGMRMIPVAFVFNRFPRTVRDTAKALDKEIDFEIEGSDIELDRTVLDELAEPLTHLIR 658
            VM  RM P+  VF RFPR VRD A+ L KEI+ E+ G + +LD+ +++ LA+PL HL+R
Sbjct: 427 AVMKTRMQPIKKVFGRFPRLVRDLARQLKKEINLELVGEETDLDKNLVEALADPLVHLVR 486

Query: 659 NSLDHGIEHADERIKLGKPEKGILKLIATRQRDRVNIIIRDDGKGIDPEAMRKKAFEKGL 718
           N++DHGIE  +ER   GK   G + L A ++ D + + I DDGKG+DP  +R  A ++G+
Sbjct: 487 NAVDHGIETPEEREATGKSRGGRVILSAEQEGDHILLSISDDGKGMDPNVLRSIAVKRGV 546

Query: 719 YSKEEAEKLTDNEAVNVIFHPGFSTAEVVSDVSGRGVGMDVVRSKIESLGGSVTVNSEVG 778
             K+ A++L+D +  N+IF PGFST   +SDVSGRGVGMDVV++KI  L GS+ + S  G
Sbjct: 547 MDKDAADRLSDTDCYNLIFAPGFSTKTEISDVSGRGVGMDVVKTKISQLNGSINIYSTKG 606

Query: 779 KGTEITLHLPLTMAIIQTLLIRLNEHIYALPLTSVLDVISVEKEQIKNLEGQEAIIYRNH 838
           +G++I + +PLT+AI+ TL++ L    +A PL +V ++  +       ++GQE +I R+ 
Sbjct: 607 QGSKIVIKVPLTLAIMPTLMVMLGNQAFAFPLVNVNEIFHLNLSTTNVVDGQEVVIVRDK 666

Query: 839 ILPVIWLKDAL-NTSGFSDSDDLYVVVVEKNKGKVGMILDEVIGRDEIVVKPLTGILKNI 897
            LP+ +LK  L +++   +  + +VV++     ++G ++D+++G++E+V+KPL  +L+  
Sbjct: 667 ALPLFYLKRWLVSSAAHEEQREGHVVILTVGTQRIGFVVDQLVGQEEVVIKPLGKMLQGT 726

Query: 898 NGLAGATILGDGRVALILDL 917
            G++GATI GDGR+ALILD+
Sbjct: 727 PGMSGATITGDGRIALILDV 746



 Score = 76.3 bits (186), Expect = 7e-18
 Identities = 38/120 (31%), Positives = 71/120 (59%), Gaps = 1/120 (0%)

Query: 5   EQYKELFMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTLGFEHISS 64
           E+  + F+ EA E L+ L++ +VELE+ P+D++ ++N IFR  HT+KG A  L    +  
Sbjct: 7   EEILQDFLVEAGEILEQLSEQLVELESRPDDAD-LLNAIFRGFHTVKGGAGFLQLHELVE 65

Query: 65  LTHHMEDILDYIRDGKIKVNPEIVDLLFKCLDALETMVSEVSDGEDTTSVDVDSLVEVIK 124
             H  E++ D +R G+ +V+ E++D++ + LD + +M  +V +  D T    + L  + +
Sbjct: 66  CCHIAENVFDILRKGERRVDSELMDVVLEALDTVNSMFGQVRERTDVTPATPELLAALAR 125