Pairwise Alignments

Query, 920 a.a., chemotaxis protein CheA from Methanococcus maripaludis S2

Subject, 693 a.a., CheA Signal Transduction Histidine Kinases (STHK) (NCBI) from Rhodospirillum rubrum S1H

 Score =  290 bits (743), Expect = 2e-82
 Identities = 169/471 (35%), Positives = 274/471 (58%), Gaps = 15/471 (3%)

Query: 450 VIKDLKEKGTVLETEPPEEKIQEGTLGGNTVTIYYDSDESEDDIKEIISKTPEITEFLVN 509
           VI D++    +LE+   + +I E         +    D +++ +   +S+   +   LV 
Sbjct: 223 VIDDMELSIDLLESGEEDRRIGE--------ILVERGDVAQEAVDTAVSRQLPLGTLLV- 273

Query: 510 VQKDTNNLKDNTKIKNTVDATSKKQAENSSSKKSQTVRVNIEKLDKLMNLVGEVVINRAN 569
              ++ NL  +       +    +      +K + ++RV  E+LD+LM+ VGE+VI ++ 
Sbjct: 274 ---ESGNLSPDKLTSALAEQQHLRTETKVVAKGADSIRVPAERLDELMDRVGELVIAQSR 330

Query: 570 FTQIATKYDLKELHNAVGRLNMLATELQEEVMGMRMIPVAFVFNRFPRTVRDTAKALDKE 629
            TQ+A   +  ++      +  LA EL++  MG+RM+P++ +F RF R V D A  L K+
Sbjct: 331 LTQVAASINDMQVKAIAEEIERLAHELRDTTMGVRMVPISSLFGRFRRLVHDLAHDLGKQ 390

Query: 630 IDFEIEGSDIELDRTVLDELAEPLTHLIRNSLDHGIEHADERIKLGKPEKGILKLIATRQ 689
           I+    G + ELD+TV++ L +PL HLIRNS+DHG+E  + R + GKP  G + L A   
Sbjct: 391 IELTTFGEETELDKTVIERLNDPLIHLIRNSIDHGLETPEGRKEAGKPPAGRITLSARHS 450

Query: 690 RDRVNIIIRDDGKGIDPEAMRKKAFEKGLYSKEEAEKLTDNEAVNVIFHPGFSTAEVVSD 749
              V + I DDG+G+D   ++ +A E+GL +     KL+DN+   VIF  GFSTA+VV+ 
Sbjct: 451 GAEVLVSIIDDGRGLDRARIQARAEEQGLLA--PGVKLSDNDLFQVIFQAGFSTAKVVTS 508

Query: 750 VSGRGVGMDVVRSKIESLGGSVTVNSEVGKGTEITLHLPLTMAIIQTLLIRLNEHIYALP 809
           +SGRGVGMDVV+  IE L G + + S  GKGTE+TL LPLT+AII  LL+R+ +  Y LP
Sbjct: 509 LSGRGVGMDVVKRTIEGLRGKIDIASTPGKGTELTLRLPLTLAIIDGLLVRVGKARYVLP 568

Query: 810 LTSVLDVISVEKEQIKNLEGQEAIIYRNHILPVIWLKDALNTSGFSDSDDLYVVVVEKNK 869
           L++V + + +  E+     G+  +  R  ++P + L++    S  +D     VV+V   +
Sbjct: 569 LSAVEECVELSAEEDGRSRGRSFLNIRGDLVPFLRLRELFQVSAPADPYQ-KVVIVSSGE 627

Query: 870 GKVGMILDEVIGRDEIVVKPLTGILKNINGLAGATILGDGRVALILDLNNI 920
            +VG+++D+VIG  + V+K L+ +  ++   +GATILGDG VALILD+ ++
Sbjct: 628 FRVGLVVDQVIGNHQTVIKSLSKLHADVETFSGATILGDGAVALILDIGHL 678



 Score = 76.6 bits (187), Expect = 5e-18
 Identities = 36/118 (30%), Positives = 70/118 (59%), Gaps = 4/118 (3%)

Query: 9   ELFMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTLGFEHISSLTHH 68
           E F  EA+E L+ L Q +++LE+ P+D + +I+  FR+ HT+KGS    GF+ +++ THH
Sbjct: 8   ETFRQEAQELLEQLEQALLDLEHAPDDGD-LIDSAFRALHTIKGSGSMFGFDAVAAFTHH 66

Query: 69  MEDILDYIRDGKIKVNPEIVDLLFKCLDALETMVSEVSDGEDTTSVDVDSLVEVIKSV 126
           +E   D +R GK+  + E++ +     D +  ++ +    E   S + D+++  +K++
Sbjct: 67  VETAFDLVRKGKVTPSRELIAVALAAKDRMRLLIEQ---PETPESAEGDAILRDLKAI 121