Pairwise Alignments

Query, 920 a.a., chemotaxis protein CheA from Methanococcus maripaludis S2

Subject, 711 a.a., chemotaxis protein CheA from Phaeobacter inhibens DSM 17395

 Score =  258 bits (658), Expect = 1e-72
 Identities = 143/400 (35%), Positives = 246/400 (61%), Gaps = 11/400 (2%)

Query: 529 ATSKKQAENSSSK-KSQTVRVNIEKLDKLMNLVGEVVINRANFTQIATKYDLKELHNAVG 587
           A  K +A  S  +  + T+RV++E++D+L+N VGE++IN +   Q     D+ +L +   
Sbjct: 293 AAPKAEAAKSEQRGPNPTLRVDLERVDRLINAVGELIINHSMLAQQIANLDVADLRDVET 352

Query: 588 RLN---MLATELQEEVMGMRMIPVAFVFNRFPRTVRDTAKALDKEIDFEIEGSDIELDRT 644
            L     LA ++QE VM +R  PV  +F R  R VR+ + A  K      EG   E+D+T
Sbjct: 353 ELEGFKNLARDIQEGVMSIRAQPVKPLFQRMARIVREASSATGKTAKLITEGEGTEVDKT 412

Query: 645 VLDELAEPLTHLIRNSLDHGIEHADERIKLGKPEKGILKLIATRQRDRVNIIIRDDGKGI 704
           V++ L++PLTH++RN++DHGIE  ++R   GK + G ++L A+ +   V I I+DDG G+
Sbjct: 413 VIERLSDPLTHILRNAVDHGIEKPEDREAAGKTKSGEIRLSASHRSGSVCIEIKDDGAGV 472

Query: 705 DPEAMRKKAFEKGLYSKEEAEKLTDNEAVNVIFHPGFSTAEVVSDVSGRGVGMDVVRSKI 764
           +   +++ A +KGL    E   L+D+E  N++F PGFSTA+ +S++SGRGVGMDVV++ +
Sbjct: 473 NRPRVKQIAIDKGLI--PENADLSDSEIDNLLFLPGFSTAKEISNLSGRGVGMDVVKNAV 530

Query: 765 ESLGGSVTVNSEVGKGTEITLHLPLTMAIIQTLLIRLNEHIYALPLTSVLDVISVEKEQI 824
            +LGG + + S  GKG+  T+ LPLT+A++  +++ + +    +P+TS+++ +    + +
Sbjct: 531 TALGGRINIASTPGKGSVFTIILPLTLAVMDGMVVSVADQTMVVPITSIVETMRGSDDMV 590

Query: 825 KNLEGQEAII-YRNHILPVIWLKDALNTSGFSDSDD---LYVVVVEKNKGKVGMILDEVI 880
            NL     ++  R + +PV  +  AL  S  +D D    +Y++V  +   +  + +D++ 
Sbjct: 591 NNLGADGTLLSIRGNFVPVCDVGGALGLSK-ADQDQPPGVYLLVETETGQRSALAVDDIH 649

Query: 881 GRDEIVVKPLTGILKNINGLAGATILGDGRVALILDLNNI 920
            + ++V+K L G+  NI G+A ATILGDG++A+ILD  +I
Sbjct: 650 DQRQVVIKSLDGVCGNIPGVAAATILGDGKIAMILDPESI 689



 Score = 74.7 bits (182), Expect = 2e-17
 Identities = 41/157 (26%), Positives = 80/157 (50%), Gaps = 7/157 (4%)

Query: 8   KELFMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTLGFEHISSLTH 67
           ++ F  E EE L+++++ +  +E    D E ++N +FR+ H++KG A   G + + +  H
Sbjct: 6   QDTFFEECEELLEAMDEGLTAIEGGDHDPE-VVNAVFRAVHSIKGGAGAFGLDELVAFAH 64

Query: 68  HMEDILDYIRDGKIKVNPEIVDLLFKCLDALETMVSEVSDGEDTTSVDVDSLVEVIKSVK 127
             E + D +R  +++++ +++ LL +C D L  +V+   DG        D LV    S  
Sbjct: 65  KFETVFDEVRANRLQLDTKLIQLLLRCSDHLSDLVATSRDGGSVDEAHNDVLV----SAL 120

Query: 128 EKYLSGENSKE--DSLDYSDPNEVAKKQVEEKTVNNI 162
           E+Y+  E  +     +      E+A  +VE++ V  I
Sbjct: 121 EEYIDEEEEEVVFQPMGLGGAFEMAAIEVEQERVYTI 157