Pairwise Alignments

Query, 920 a.a., chemotaxis protein CheA from Methanococcus maripaludis S2

Subject, 776 a.a., hybrid sensor histidine kinase/response regulator from Ralstonia sp. UNC404CL21Col

 Score =  216 bits (550), Expect = 4e-60
 Identities = 115/334 (34%), Positives = 191/334 (57%), Gaps = 1/334 (0%)

Query: 588 RLNMLATELQEEVMGMRMIPVAFVFNRFPRTVRDTAKALDKEIDFEIEGSDIELDRTVLD 647
           R   LA +L +E +  RM P     + +PR VRD A++L K + F I G   ++DR +LD
Sbjct: 292 RSTHLAQQLYDEALQCRMRPFGDATHAYPRVVRDLARSLGKHVRFNIVGEATQVDRDILD 351

Query: 648 ELAEPLTHLIRNSLDHGIEHADERIKLGKPEKGILKLIATRQRDRVNIIIRDDGKGIDPE 707
            L  PL HL+RN++DHG+E    R   GKP +  + L A     ++ I + DDG GID E
Sbjct: 352 MLDAPLGHLLRNAVDHGVEAPQAREAQGKPAEAAITLEARHSAGKLLITVADDGAGIDLE 411

Query: 708 AMRKKAFEKGLYSKEEAEKLTDNEAVNVIFHPGFSTAEVVSDVSGRGVGMDVVRSKIESL 767
           A+R     +GL   + A +L+D+E ++ +  PGFS  E V+DVSGRGVG+D V   ++++
Sbjct: 412 AVRAAVVRRGLSDVDTASRLSDHELLDFLLLPGFSMREQVTDVSGRGVGLDAVHEMVKAV 471

Query: 768 GGSVTVNSEVGKGTEITLHLPLTMAIIQTLLIRLNEHIYALPLTSVLDVISVEKEQIKNL 827
            G+V +++E G+GT   L LPLT+++I++LL+ +    YA PL  V   + + + +I  L
Sbjct: 472 RGTVRIHNEPGRGTRFMLQLPLTLSVIRSLLVDVGGEAYAFPLAYVRRTLELARSEIDML 531

Query: 828 EGQEAIIYRNHILPVIWLKDALNTSGFSDS-DDLYVVVVEKNKGKVGMILDEVIGRDEIV 886
           EGQ+   +    + ++     L T    ++ D + VVV+ +     G+ +D  +G   +V
Sbjct: 532 EGQQHFSFEGRPVGLVTAHQLLGTQPPGEARDSVPVVVIGEGAETYGIAVDRFLGERMLV 591

Query: 887 VKPLTGILKNINGLAGATILGDGRVALILDLNNI 920
           V+PL   L  +  +A   ++ +G   LI+D++++
Sbjct: 592 VQPLDARLGKVRDIAAGALMENGDAVLIVDVDDL 625



 Score = 43.5 bits (101), Expect = 5e-08
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 10  LFMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTLGFEHISSLTHHM 69
           LF  EA+   + L+  ++ LE  P D+  +     R+AH+LKG+AR +G +    + H M
Sbjct: 15  LFHEEAQTQTRVLSTGLLTLERAPTDAAAL-EACMRAAHSLKGAARIVGLQDGVDVAHRM 73

Query: 70  EDILDYIRDGKIKVNPEIVDLLFKCLDAL 98
           E+     +   + +    +D+L +  D L
Sbjct: 74  EEWFVAAQRATLVLTAAHIDVLLRGTDLL 102