Pairwise Alignments

Query, 920 a.a., chemotaxis protein CheA from Methanococcus maripaludis S2

Subject, 766 a.a., two-component system chemotaxis sensor kinase CheA from Paraburkholderia graminis OAS925

 Score =  290 bits (743), Expect = 2e-82
 Identities = 155/395 (39%), Positives = 243/395 (61%), Gaps = 8/395 (2%)

Query: 528 DATSKKQAENSSSKKSQTVRVNIEKLDKLMNLVGEVVINRANFTQIATKYDLK---ELHN 584
           D  + + A  +   +  ++RV +EK+D+L+NLVGE+VI +A   +  + +D      L N
Sbjct: 358 DRKAARPAAAAGGAEGSSIRVGVEKVDQLINLVGELVITQAMLAETTSTFDPALHDRLFN 417

Query: 585 AVGRLNMLATELQEEVMGMRMIPVAFVFNRFPRTVRDTAKALDKEIDFEIEGSDIELDRT 644
            + +L   A +LQE VM +RM+P+ +VF+RFPR VRD A  L KE++    G   ELD++
Sbjct: 418 GMAQLERNARDLQEAVMSIRMMPMDYVFSRFPRLVRDLAAKLGKEVELVTFGQATELDKS 477

Query: 645 VLDELAEPLTHLIRNSLDHGIEHADERIKLGKPEKGILKLIATRQRDRVNIIIRDDGKGI 704
           +++ + +PLTHL+RNSLDHGIE  + R   GK   G L L A      + I + DDG G+
Sbjct: 478 LIERIIDPLTHLVRNSLDHGIETVEARRAAGKDATGQLVLSAAHHGGNIVIEVSDDGAGL 537

Query: 705 DPEAMRKKAFEKGLYSKEEAEKLTDNEAVNVIFHPGFSTAEVVSDVSGRGVGMDVVRSKI 764
             + +  KA ++G+   + +E +TD E  N+IF PGFSTAE V+DVSGRGVGMDVV+  I
Sbjct: 538 RRDKILAKAAKQGM---QVSESMTDEEVWNLIFLPGFSTAEQVTDVSGRGVGMDVVKRNI 594

Query: 765 ESLGGSVTVNSEVGKGTEITLHLPLTMAIIQTLLIRLNEHIYALPLTSVLDVISVEKEQI 824
           +S+GG V + S  GKG+   + LPLT+AI+  + +++   I+ LPL  V++ +  + E I
Sbjct: 595 QSMGGHVEITSHAGKGSTTRIVLPLTLAILDGMSVKVGNEIFILPLNFVMESLQPQAEDI 654

Query: 825 KNL-EGQEAIIYRNHILPVIWLKDALNTSGFSDSDDLYVVVVEKNKG-KVGMILDEVIGR 882
             +  G+  +  R   LP++ L +  N  G        +V + + +G +  M++DE++G+
Sbjct: 655 YTVANGERVVRVRGEYLPLVALHEVFNVDGAKQEPTQGIVTIMQTEGRRFAMLIDELVGQ 714

Query: 883 DEIVVKPLTGILKNINGLAGATILGDGRVALILDL 917
            ++VVK L    + + G++ ATILGDGRVALI+D+
Sbjct: 715 QQVVVKNLETNYRKVRGISAATILGDGRVALIVDV 749



 Score = 65.1 bits (157), Expect = 2e-14
 Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 7/173 (4%)

Query: 3   DMEQYKELFMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTLGFEHI 62
           D+ Q+ + F  EA+E L  + Q ++ L+    D E +   IFR+AH++KG A T GF  +
Sbjct: 4   DITQFYQTFFDEADELLAQMEQLLLNLDIAHPDPEDLA-AIFRAAHSIKGGAATFGFTAL 62

Query: 63  SSLTHHMEDILDYIRDGKIKVNPEIVDLLFKCLDALETMVSEVSDGEDTTSVDVDSLVEV 122
           +  TH +E +LD  R+ ++ +  +++D   +  D L   +++        S + D+ V  
Sbjct: 63  TETTHILESLLDRARNNELVLRKDMIDTFLETKDVLSGQLADY-----RASAEPDAAVAK 117

Query: 123 IKSVKEKYLSGENSKEDSLDYSDPNEVAKKQVEEKTVNNISSNSGSIHLVNES 175
               K + L  E+    +   + P EVA     E+    +   S   H+V+++
Sbjct: 118 AICAKLEQLHAESRGMAAPAAAAPVEVAVAAPIEEFA-TVEEGSAPEHVVDQA 169