Pairwise Alignments

Query, 365 a.a., chemotaxis response regulator protein-glutamate methylesterase from Methanococcus maripaludis S2

Subject, 1483 a.a., Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity (NCBI) from Rhodospirillum rubrum S1H

 Score = 82.4 bits (202), Expect = 7e-20
 Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 6/201 (2%)

Query: 148 KEKQDESSTPKPQVEKTSGLSPEKLNDTAILIGSSTGGPPVVSSIISNIPKNTP-PIFIV 206
           + + +E  +P     +  G S E      + IG+S GG     ++++ +P      + +V
Sbjct: 13  RSRAEEGVSPTDGASEGKGGSGEADRFRVVGIGASAGGLEACKALLAALPDRPGIALILV 72

Query: 207 QHMPKGFTRVFAERMNNNSAITVKEAEHGEIVKPDHAYVAPGDSQMVLQKRGGNVYIIID 266
           QH+      +    +   + +TV +A  G IV+PDH YV P  +   L   GG +++   
Sbjct: 73  QHLDPTHESMMVALLALQTTMTVCQAAEGMIVEPDHLYVIPPGAY--LSVAGGTLHLSPP 130

Query: 267 ENMPKIHGTKPTVDVTAEYVTKYYGKNTIGVLLTGIGRDGANGLKMVKNKGGYTIAQNQD 326
           +     HG +   D     +   Y +  I V+L+G G DG+ GL  +K +GG  IAQ+ +
Sbjct: 131 QAR---HGARLPFDFLLHSLAADYTQRAICVVLSGTGADGSLGLMALKERGGLVIAQDPE 187

Query: 327 TCVIYGMPKTAIEMNVVDKVM 347
                GMP++AI    VD V+
Sbjct: 188 EAGYDGMPRSAIATGQVDLVL 208



 Score = 38.1 bits (87), Expect = 2e-06
 Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 13/137 (9%)

Query: 6    VLIVDDSAFMRKVLEDILKSDDEIEVVATAKDGKEAFELVKKLEPN----VITMDVEMPI 61
            + +VDD A +R  L  +L+ DD ++V    +D + +   +    P      + +D  +P 
Sbjct: 1277 IYLVDDDASLRDSLRALLE-DDGLKV----EDYESSEAFLAAYRPGGGEACLLIDAYLPG 1331

Query: 62   MNGIDATKQIMAYKPTPILMLSAVTKQGSEA-TLKALDNGAVDFIEKPSGSVSLDIRKIG 120
            M+G+D  +++   K   +L    +T     A  ++A+  GA DFIEKP G   L I  I 
Sbjct: 1332 MSGLDLLERLK--KENRLLPAIVITGYSEVAMAVQAMKAGASDFIEKPVGRTELLI-SID 1388

Query: 121  EKIIKQVKDASKSKVRI 137
              + +  +  +  K+R+
Sbjct: 1389 RALEQHREHGNSGKMRL 1405



 Score = 32.0 bits (71), Expect = 1e-04
 Identities = 24/84 (28%), Positives = 49/84 (58%), Gaps = 7/84 (8%)

Query: 5    KVLIVDDSAFMRKVLEDILKSDDEIEVVATAKDGKEAFELVK--KLEPNVITMDVEMPI- 61
            ++LI++D   +R +L+ +LK +     VA A+ G +A  L +   + P++I  D  +P  
Sbjct: 1133 EILIIEDDPDVRDLLDLLLKGEGH-RTVAVAEGG-QAVALAEGGSIRPDLILADYNLPNG 1190

Query: 62   MN--GIDATKQIMAYKPTPILMLS 83
            +N  G+ AT + +  +P P+++L+
Sbjct: 1191 VNGLGVSATLRDVLDRPIPVVILT 1214