Pairwise Alignments

Query, 147 a.a., chemotaxis protein CheW from Methanococcus maripaludis S2

Subject, 317 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella loihica PV-4

 Score = 55.8 bits (133), Expect = 6e-13
 Identities = 37/142 (26%), Positives = 77/142 (54%), Gaps = 10/142 (7%)

Query: 6   KVVVFKL-ASNEYCLRVTGVREVLKLQDITSIPNTPDYIVGVTNIRGEIMPIIDLRRKLN 64
           ++++F++ A+  + + V  V+EV+KL  ++++P +   I GV NIRG  +P+IDLR  + 
Sbjct: 21  ELLLFRINATQLFAINVFKVKEVVKLPKLSALPGSHPSIKGVANIRGTSIPVIDLRAAIG 80

Query: 65  LFEDLGDESIDEKLVMVVEIDGVPIGILVDSVSDVMQISAEQIEDIEGIKKNASGEYIEG 124
            F+ +  +   E  +++ E +    G +V  V  ++ ++   I  +   K   S  Y+  
Sbjct: 81  -FQPMNSD--QEANLIITEYNRSVQGFMVGKVDHIINMTWSDI--MPPPKSTGSHNYLTA 135

Query: 125 IAKI----GNRLIIILDIKNLI 142
           I K+      RL+ I+D++ ++
Sbjct: 136 ITKVEVDGATRLVSIIDVEKVL 157