Pairwise Alignments

Query, 147 a.a., chemotaxis protein CheW from Methanococcus maripaludis S2

Subject, 314 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella loihica PV-4

 Score = 55.5 bits (132), Expect = 7e-13
 Identities = 30/138 (21%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 7   VVVFKLASNE-YCLRVTGVREVLKLQDITSIPNTPDYIVGVTNIRGEIMPIIDLRRKLNL 65
           +++F+L+  + + L    +RE++    +++IP +   I+G   +RG  +PIID+   +  
Sbjct: 28  LLLFRLSHTQLFALGTLKIRELVPFSKLSAIPQSHPAILGAATVRGHTIPIIDMAAAVG- 86

Query: 66  FEDLGDESIDEKLVMVVEIDGVPIGILVDSVSDVMQISAEQIED-IEGIKKNASGEYIEG 124
           +  +  E      +++ +   + +G LV S+  +++ +   IE   + + KNA   ++ G
Sbjct: 87  YAPITPEECANAYIIITDCQRMVMGFLVRSIDKIIECNWRDIESPPDNLGKNA---FLTG 143

Query: 125 IAKIGNRLIIILDIKNLI 142
           + ++ ++L+ +LD++ L+
Sbjct: 144 VTRVDDKLVQLLDVELLL 161