Pairwise Alignments

Query, 147 a.a., chemotaxis protein CheW from Methanococcus maripaludis S2

Subject, 185 a.a., CheW protein (RefSeq) from Shewanella loihica PV-4

 Score = 85.9 bits (211), Expect = 3e-22
 Identities = 45/145 (31%), Positives = 82/145 (56%), Gaps = 1/145 (0%)

Query: 2   DDVPKVVVFKLASNEYCLRVTGVREVLKLQDITSIPNTPDYIVGVTNIRGEIMPIIDLRR 61
           D   + + F +A  EY + +  V+E+   +  T IPN+P ++ GV N+RG I+PIIDLR+
Sbjct: 16  DASDQYLTFIMADEEYGVDILSVQEIRGWEPTTVIPNSPSHVKGVINLRGTIVPIIDLRQ 75

Query: 62  KLNLFE-DLGDESIDEKLVMVVEIDGVPIGILVDSVSDVMQISAEQIEDIEGIKKNASGE 120
           +  +   D G  ++   + + V  +   IGI+VD+VSDV  +    + D     +     
Sbjct: 76  RFGIASLDYGPTTVVIVIKVCVGDEHKVIGIVVDAVSDVFSVHHRDLRDAPDFGEETDLT 135

Query: 121 YIEGIAKIGNRLIIILDIKNLIDPQ 145
           +I+G+A + ++++I+LDI  L+  +
Sbjct: 136 FIKGLANLADKMVILLDIDTLLSSE 160