Pairwise Alignments

Query, 147 a.a., chemotaxis protein CheW from Methanococcus maripaludis S2

Subject, 178 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 77.8 bits (190), Expect = 8e-20
 Identities = 36/141 (25%), Positives = 83/141 (58%), Gaps = 1/141 (0%)

Query: 3   DVPKVVVFKLASNEYCLRVTGVREVLKLQDITSIPNTPDYIVGVTNIRGEIMPIIDLRRK 62
           D+ + + F+ A++ + + +  V+E+++++ IT +P  P+++ G+ N+RG+++P+IDL ++
Sbjct: 15  DITQYLTFQSANDTFAIGILDVKEIIEIEGITRVPMMPEFLCGIINLRGKVVPVIDLSKR 74

Query: 63  LNLFEDLGDESIDEKLVMVV-EIDGVPIGILVDSVSDVMQISAEQIEDIEGIKKNASGEY 121
           L     +  +     LV V  E +   IG+LVD V+++++I  E  +       +   ++
Sbjct: 75  LGRLTTVISKKSCIVLVEVSHEDERQTIGMLVDEVNEILEIDDEHTQPPPDFGADLRVDF 134

Query: 122 IEGIAKIGNRLIIILDIKNLI 142
           I  + ++G   +I+LDI  ++
Sbjct: 135 IRAMGRVGEHFMILLDINYVL 155