Pairwise Alignments

Query, 147 a.a., chemotaxis protein CheW from Methanococcus maripaludis S2

Subject, 158 a.a., chemotaxis protein CheW (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  105 bits (262), Expect = 3e-28
 Identities = 48/141 (34%), Positives = 90/141 (63%), Gaps = 3/141 (2%)

Query: 2   DDVPKVVVFKLASNEYCLRVTGVREVLKLQDITSIPNTPDYIVGVTNIRGEIMPIIDLRR 61
           D++ ++V F +   E+ + +  V+E+++  +IT +P  P+++ GV N+RG+++PIIDLRR
Sbjct: 10  DELLQLVTFSIGEEEFGVDILKVQEIIRTMEITKVPRAPEFVEGVINLRGKVIPIIDLRR 69

Query: 62  KLNLFEDLGDESIDEKLVMVVEIDGVPIGILVDSVSDVMQISAEQIEDIEGIKKNASGEY 121
           +  L     D+      ++V+EI+ + +G +VDSVS+V++I A  +E    +      EY
Sbjct: 70  RFGLDSKTHDK---HTRIIVIEINNMIVGFVVDSVSEVLRIPASTVEPPPPVVAGLESEY 126

Query: 122 IEGIAKIGNRLIIILDIKNLI 142
           I G+ K+ +RL+I+LD+  L+
Sbjct: 127 ISGVGKLQDRLLILLDLDRLL 147



 Score = 26.6 bits (57), Expect = 2e-04
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 8/76 (10%)

Query: 2   DDVPKVVVFKLASNEYCLRVTGVREVLKLQDITSIPNTP-------DYIVGVTNIRGEIM 54
           D   +++V ++ +      V  V EVL++   T  P  P       +YI GV  ++  ++
Sbjct: 79  DKHTRIIVIEINNMIVGFVVDSVSEVLRIPASTVEPPPPVVAGLESEYISGVGKLQDRLL 138

Query: 55  PIIDLRRKLNLFEDLG 70
            ++DL R L+  +D+G
Sbjct: 139 ILLDLDRLLS-NDDIG 153