Pairwise Alignments

Query, 200 a.a., tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY from Methanococcus maripaludis S2

Subject, 205 a.a., tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY from Vibrio cholerae E7946 ATCC 55056

 Score = 60.1 bits (144), Expect = 3e-14
 Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 12/202 (5%)

Query: 1   LKEFIIKANKAVTNGEINLKDLPGSSGRLDLLCRCVNSAFFLSHDMRRDTIFYSVNYGSP 60
           ++ FI++A  A T+ +  L D  G     ++L  C+ ++ F +   R D + + V   + 
Sbjct: 5   MRSFILRARSAPTDSQ-RLLDEIGGKCHTEILAHCMMNSLFTAQSHREDVVIHLVLESTR 63

Query: 61  NPPVALKFVGSELKRVSP-DERSIALFIKKALEKDASELWKESTS----GIYSSKREFRD 115
           +    +    +E+  V    E ++   + KAL+     + KE T     G+      F +
Sbjct: 64  DYSRTITVEANEISDVGGFHEAALIALLVKALDASVG-MGKEQTRVVQPGLTVRTISF-E 121

Query: 116 IILEKKNEGKRIFYLHLNGKPLEDFEFKNQDDEDFLFVLGDHIGIGDEDEEFLEEIGAEK 175
            +L +  E   ++ +   G  + D +          F+L DHI +  +    ++ +G EK
Sbjct: 122 ALLGELAEHHSLYMMDKKGDSIRDIKIGPNP----CFILTDHIPMPKKSGNSMKRLGVEK 177

Query: 176 ISLSPLELHADHCIILVHNILD 197
           ISL P  L A  C+ L+HN +D
Sbjct: 178 ISLGPKMLFASQCVTLIHNEID 199