Pairwise Alignments

Query, 255 a.a., dihydroorotate dehydrogenase electron transfer subunit from Methanococcus maripaludis S2

Subject, 232 a.a., FMN reductase (RefSeq) from Shewanella amazonensis SB2B

 Score = 41.6 bits (96), Expect = 1e-08
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 14/144 (9%)

Query: 5   VMCKIIDVIDESPTVKTFLLDNE--FDFKPGQFAMVWIPEIDEKPFGFSSK--NSISIAK 60
           + CK++ +   +  V    L  E   +FK GQ+  V + E D++PF  +S   N      
Sbjct: 4   IRCKVLSITPFNDAVYQVSLAPETPLEFKAGQYLCVVMGEKDKRPFSIASAPGNDTLELH 63

Query: 61  VGKFTEK------IHSLKKGDLLGIRGPYGNNF--ECIGTKILAVAGGIGSAPVISAVEA 112
           +G    +      +  LK    + I  P G+ F  E      L +AGG G + + S VE 
Sbjct: 64  IGAAVSESYPMQVVERLKTESHIDIEAPGGDAFLREDSHRPRLLIAGGTGFSYIKSIVEQ 123

Query: 113 FSKLG--VEITSVIGGRTKDELLF 134
              LG  VE T   G RT+D + +
Sbjct: 124 QIALGQKVETTLYWGCRTQDAMYY 147