Pairwise Alignments

Query, 255 a.a., dihydroorotate dehydrogenase electron transfer subunit from Methanococcus maripaludis S2

Subject, 325 a.a., iron-sulfur cluster-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 41.6 bits (96), Expect = 2e-08
 Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 35/203 (17%)

Query: 27  EFDFKPGQFAMVWIPEIDE----KPFGFSSKNS------ISIAKV-GKFTEK--IHSLKK 73
           +FD+KPGQF + ++ EI+     + +  SS  S      ++I +V G       I  L+ 
Sbjct: 2   KFDYKPGQF-ITFVLEINGEQACRSYTLSSTPSRPYSLMVTIKRVDGGLVSNYLIDHLQP 60

Query: 74  GDLLGIRGPYG--NNFECIGTKILAVAGGIGSAPVISAVEAFS--KLGVEITSVIGGRTK 129
           G  + +  P G  N F+    K L ++ G G  P+ S     +  ++  +I  V   RT+
Sbjct: 61  GQTVRVLPPTGQFNLFDIPANKYLFLSAGCGITPMYSMSRYLTDTQINADIAVVHSARTQ 120

Query: 130 DELLFLDRFEKCGKTFAC-----------------TDDCSFGFGGFTTEKMLELLLEEKF 172
            +++F +  E      A                  T++     G  + + +L L+ +   
Sbjct: 121 ADIIFKNTLETMAARHASFKLCYLVEGVTTDTVWHTEEAFHYVGRLSAQNLLSLVPDFAE 180

Query: 173 DMVITCGPEIMMKKVVEIAEQNN 195
            +V  CGPE+ M+ V  I  + N
Sbjct: 181 RIVFLCGPELYMQAVKTILTELN 203