Pairwise Alignments

Query, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

Subject, 267 a.a., Diaminopimelate epimerase (EC 5.1.1.7) from Pseudomonas fluorescens FW300-N2E2

 Score =  145 bits (366), Expect = 9e-40
 Identities = 78/273 (28%), Positives = 143/273 (52%), Gaps = 13/273 (4%)

Query: 1   MKFTKMHGLGNDYIYVDAISQKIENPNEISKFVSDRHFGIGSDGLVLILPSDVADFKMRM 60
           + F KMH  G+D++ VD+        + +++ + DR+ G+G + L ++L  D AD ++  
Sbjct: 3   LNFQKMHANGDDFVIVDSRHSANPVTSAMAQRMGDRNRGVGFNQLAVLLDCDDADARVMF 62

Query: 61  FNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEMTIENGKVVLVKVDM 120
           +N+DGS  ++CG+A R     +   +  + +++ + T  G+   E T        + VDM
Sbjct: 63  WNADGSALDVCGSATRGAADMLM--REANVASVALRTNRGLLTCERTPTGD----ISVDM 116

Query: 121 GEPILKAEEIPVLSEKHPVIDEEITAKDYCYNFTCVSMGNPHAITYIENVDEFPLEKIGP 180
           G P+    +IP+  E       + T      +    SMGNPH   +++++    +  IGP
Sbjct: 117 GVPLFDWSDIPLAQEL------DTTVLPLAGSPVACSMGNPHCTYFVDDLATVDIATIGP 170

Query: 181 LFEIHEKFPRKTNVEFVELIDKNTVKMRVWERGAGETLACGTGACAVLTASVLKGYVGRK 240
             E +  FP KTNV FV++ID+  +++R+WERGAG  L  G+ +C  +   + +G +  +
Sbjct: 171 AIETNALFPLKTNVHFVQIIDRTHIRLRIWERGAGIALGSGSCSCGAVVNGIRRGLLDPR 230

Query: 241 ATVKLLGGDLTIEWNEFDKHIYMTGPATTVFEG 273
             V+  GG +T++W+     +++ GP    F G
Sbjct: 231 VEVECDGGSVTVQWDGVGA-VFLIGPVEVSFSG 262