Pairwise Alignments

Query, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

Subject, 333 a.a., Diaminopimelate epimerase (EC 5.1.1.7) from Pseudomonas fluorescens FW300-N2E2

 Score = 43.9 bits (102), Expect = 5e-09
 Identities = 50/240 (20%), Positives = 101/240 (42%), Gaps = 31/240 (12%)

Query: 42  SDGLVLILPSDVADFKMRMFNSDGSEAEMCGNAIRCVGKFVYDKKM---TDKSTITI--E 96
           SDGL++    +   F + + N+DG+ AE  GN +    + + ++ +   T    + +  +
Sbjct: 66  SDGLLIGPFQNEPPFDLLIVNTDGTLAERSGNGLTIFSQALQEQGLMAGTGDCLLQVHHD 125

Query: 97  TLAGIKVLEMTIENGKVVLVK---VDMGEPILKAEEIPVLSEKHPVIDE----EITAKDY 149
              G+  L+ ++   +    +   +D+G+P+     +        + ++     + A + 
Sbjct: 126 KPDGLSPLQTSVRAAEFEGAQGFWLDLGKPLFGPGAVGAQDVVRVMFNQCDVSRVAALER 185

Query: 150 CY----NFTCVSMGNPHAITYIENVDEFP-------------LEKIG--PLFEIHEKFPR 190
                 N   V++GNPH +T +++ +  P             L +I   P        P 
Sbjct: 186 LNPAWGNSQFVNIGNPHCVTLVDSAEALPSNPQMRAPALCQSLTRIAYAPPGGAGMPCPM 245

Query: 191 KTNVEFVELIDKNTVKMRVWERGAGETLACGTGACAVLTASVLKGYVGRKATVKLLGGDL 250
             N+++  L  +  +  RV+ERG G T + GT A AV  A+   G+V       ++ G L
Sbjct: 246 GVNLQWAWLEAEGRIAARVFERGEGPTASSGTSASAVACAAWRAGWVQAGPVSVMMPGGL 305