Pairwise Alignments

Query, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

Subject, 276 a.a., diaminopimelate epimerase from Pseudomonas fluorescens FW300-N2E3

 Score =  223 bits (569), Expect = 3e-63
 Identities = 113/277 (40%), Positives = 172/277 (62%), Gaps = 7/277 (2%)

Query: 1   MKFTKMHGLGNDYIYVDAISQKIENPNEISKFVSDRHFGIGSDGLVLI-LPSDV-ADFKM 58
           ++FTKMHGLGND++ +D +SQ      + +K   DRH G+G D L+++  PS+   DF+ 
Sbjct: 3   LRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGVGFDQLLIVEAPSNPDVDFRY 62

Query: 59  RMFNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEMTIENGKVVLVKV 118
           R+FN+DGSE E CGN  RC  +FV DK++T K  I +ET +GI  +E+ I N   +   V
Sbjct: 63  RIFNADGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGI--IELDIRNDGQI--SV 118

Query: 119 DMGEPILKAEEIPVLSEKHPVIDEEITAKDYCYNFTCVSMGNPHAITYIENVDEFPLEKI 178
           +MG P L   +IP  +     +  ++           VSMGNPHA+  + +++  P+ ++
Sbjct: 119 NMGAPRLVPADIPFQAPAQ-ALSYQVEVDGQTIELAAVSMGNPHAVVRVSDINNAPVHEL 177

Query: 179 GPLFEIHEKFPRKTNVEFVELIDKNTVKMRVWERGAGETLACGTGACAVLTASVLKGYVG 238
           GP  E H +FP + NV F+++ID++  ++RVWERG GET ACGTGACA   A++ +G++ 
Sbjct: 178 GPKIENHPRFPARVNVGFLQVIDRSRAQLRVWERGTGETQACGTGACAAAVAAISQGWMD 237

Query: 239 RKATVKLLGGDLTIEWNEFDKHIYMTGPATTVFEGEI 275
               + L GG L+IEW    + + MTGPA  V+EG++
Sbjct: 238 SPLLIDLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQV 274