Pairwise Alignments

Query, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

Subject, 276 a.a., diaminopimelate epimerase from Pseudomonas syringae pv. syringae B728a

 Score =  225 bits (573), Expect = 9e-64
 Identities = 115/277 (41%), Positives = 170/277 (61%), Gaps = 7/277 (2%)

Query: 1   MKFTKMHGLGNDYIYVDAISQKIENPNEISKFVSDRHFGIGSDGLVLI-LPSDV-ADFKM 58
           ++FTKMHGLGND++ +D +SQ      + +K   DRH GIG D L+L+  P++   DF+ 
Sbjct: 3   LRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLLVEAPNNPDVDFRY 62

Query: 59  RMFNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEMTIENGKVVLVKV 118
           R+FNSDGSE E CGN  RC  +FV DK++T K  I +ET +GI  L++  +      + V
Sbjct: 63  RIFNSDGSEVEQCGNGARCFARFVLDKRLTAKKQIRVETKSGIIELDIRSDGQ----ISV 118

Query: 119 DMGEPILKAEEIPVLSEKHPVIDEEITAKDYCYNFTCVSMGNPHAITYIENVDEFPLEKI 178
           DMG P    EEIP  + +       +       +   VSMGNPHA+  +++++  P+ ++
Sbjct: 119 DMGPPRFVPEEIPFEAAEQATC-YTVDVDGQHVDMAAVSMGNPHAVLRVDDINNAPVHEL 177

Query: 179 GPLFEIHEKFPRKTNVEFVELIDKNTVKMRVWERGAGETLACGTGACAVLTASVLKGYVG 238
           GP  E H +FP + NV F+ ++D+   ++RVWERGAGET ACGTGACA   A++ +G++ 
Sbjct: 178 GPKIEHHPRFPARVNVGFLHVVDRQRAQLRVWERGAGETQACGTGACAAAVAAISQGWMD 237

Query: 239 RKATVKLLGGDLTIEWNEFDKHIYMTGPATTVFEGEI 275
               + L GG L+IEW      + MTGPA  V+EG++
Sbjct: 238 SPLLIDLPGGRLSIEWAGPGHSVMMTGPAVRVYEGQV 274