Pairwise Alignments

Query, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

Subject, 279 a.a., diaminopimelate epimerase from Synechocystis sp000284455 PCC 6803

 Score =  262 bits (669), Expect = 7e-75
 Identities = 136/282 (48%), Positives = 188/282 (66%), Gaps = 10/282 (3%)

Query: 1   MKFTKMHGLGNDYIYVD--AISQKIENPNEISKFVSDRHFGIGSDGLVLILPSDVA-DFK 57
           + F+K HGLGND+I VD    ++    P++  + + DRHFGIG+DG++  LP     D+ 
Sbjct: 3   LSFSKYHGLGNDFILVDNRQSTEPCLTPDQAQQ-LCDRHFGIGADGVIFALPGQGGTDYT 61

Query: 58  MRMFNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEMTIENGKVVLVK 117
           MR+FNSDGSE EMCGN IRC+ KF+ D +  ++ T  I TLAG+ +    + +G+V   K
Sbjct: 62  MRIFNSDGSEPEMCGNGIRCLAKFLADLEGVEEKTYRIHTLAGV-ITPQLLADGQV---K 117

Query: 118 VDMGEPILKAEEIP--VLSEKHPVIDEEITAKDYCYNFTCVSMGNPHAITYIENVDEFPL 175
           VDMGEP L AE IP  +      V+D  +      +  TCVSMGNPH +T++++VD   L
Sbjct: 118 VDMGEPQLLAELIPTTLAPAGEKVVDLPLAVAGQTWAVTCVSMGNPHCLTFVDDVDSLNL 177

Query: 176 EKIGPLFEIHEKFPRKTNVEFVELIDKNTVKMRVWERGAGETLACGTGACAVLTASVLKG 235
            +IGPLFE H +F ++TN EF++++  + +KMRVWERGAG TLACGTGACA + A+VL G
Sbjct: 178 TEIGPLFEHHPQFSQRTNTEFIQVLGSDRLKMRVWERGAGITLACGTGACATVVAAVLTG 237

Query: 236 YVGRKATVKLLGGDLTIEWNEFDKHIYMTGPATTVFEGEIDI 277
              R+ TV+L GG+L IEW+  D  +YMTGPA  VF G+ +I
Sbjct: 238 RGDRRCTVELPGGNLEIEWSAQDNRLYMTGPAQRVFSGQAEI 279