Pairwise Alignments

Query, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

Subject, 280 a.a., Diaminopimelate epimerase (NCBI) from Rhodospirillum rubrum S1H

 Score =  194 bits (493), Expect = 2e-54
 Identities = 117/279 (41%), Positives = 164/279 (58%), Gaps = 16/279 (5%)

Query: 3   FTKMHGLGNDYIYVDAISQKIENPNEISKFVSDRHFGIGSDGLVLILPSDVADFK-MRMF 61
           F KMHGLGND+I +DA ++ ++   E  + ++DRH G+G D  V I P+       M + 
Sbjct: 8   FLKMHGLGNDFIVIDARTRPLDLTPERVRALADRHSGVGCDQFVTIEPARGGGVAFMGLR 67

Query: 62  NSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEMTIENGKVVLVKVDMG 121
           N+DG   E CGNA RCVG+ + +++  +  ++ IETL G+  +E    +G+  L++VDMG
Sbjct: 68  NADGEIVESCGNASRCVGRLLLEER--EAESVLIETLGGM--VEARRASGE--LIEVDMG 121

Query: 122 EPILKAEEIPVLSEKHPVIDEEITA---KDYCYNFTCVSMGNPHAITYIENVDEFPLEKI 178
              L  +EIP L+     +  E++     D C     VSMGNPHA+ ++++ D   L   
Sbjct: 122 PARLTWQEIP-LAGAADTLHIELSVGPLSDPC----AVSMGNPHAVFFVDDADAIDLATW 176

Query: 179 GPLFEIHEKFPRKTNVEFVELIDKNTVKMRVWERGAGETLACGTGACAVLTASVLKGYV- 237
           GPL E H  FP +TNVE V L     ++MRVWERG G T ACGTGACA   A++ +G + 
Sbjct: 177 GPLIEHHGLFPNRTNVEAVHLRADGRLRMRVWERGVGITRACGTGACASAVAAMRRGLIA 236

Query: 238 GRKATVKLLGGDLTIEWNEFDKHIYMTGPATTVFEGEID 276
           GR A V L GG L I W E D H+ MTG AT  + G +D
Sbjct: 237 GRTAEVVLDGGTLGIVWRESDGHVLMTGSATLAYSGVLD 275