Pairwise Alignments

Query, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

Subject, 281 a.a., diaminopimelate epimerase DapF from Phaeobacter inhibens DSM 17395

 Score =  168 bits (425), Expect = 1e-46
 Identities = 97/273 (35%), Positives = 151/273 (55%), Gaps = 15/273 (5%)

Query: 1   MKFTKMHGLGNDYIYVDAISQKIENPNEISKFVSDRHFGIGSDGLVLILPSDVADFKMRM 60
           + F KMHGLGND++ VDA  Q  +    +++ ++ R  GIG D L +I   D  D  +  
Sbjct: 12  LPFMKMHGLGNDFVVVDARDQTWDITPAMAEGIAHRQMGIGFDQLTVITKGD-EDAHLTF 70

Query: 61  FNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEMTIENGKVVLVKVDM 120
           +N+DGS +  CGNA RC+ + + D+  + K+ + + T  G+ + E    NG   L  V+M
Sbjct: 71  YNADGSTSAACGNATRCIARHLLDE--SGKTHLRLTTDRGLLLAE-DAGNG---LTSVNM 124

Query: 121 GEPILKAEEIPVLSEKHPVIDEEITAKDYCYNFTCVSMGNPHAITYIENVDEFPLEKIGP 180
           GEP L  ++IP L+E    ++  I         T   MGNPH   +++N +  PL + G 
Sbjct: 125 GEPQLDWQDIP-LAEDVDTLELPIEGAP-----TATGMGNPHCTFFVDNAEVIPLAEFGA 178

Query: 181 LFEIHEKFPRKTNVEFVELIDKNTVKMRVWERGAGETLACGTGACAVLTASVLKGYVGRK 240
            +E H  +P +TNV+   ++  + ++MRVWERG G TLA G+ +CA   A+  +G   RK
Sbjct: 179 RYEHHPLYPERTNVQVAHVVAPDHLRMRVWERGVGITLASGSSSCATAVAAARRGLTSRK 238

Query: 241 ATVKLLGGDLTIEWNEFDKHIYMTGPATTVFEG 273
             + L GG L I+W +    ++MTGP   V +G
Sbjct: 239 VQIDLDGGTLWIDWRK--DGVWMTGPTMHVADG 269