Pairwise Alignments

Query, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

Subject, 289 a.a., Probable diaminopimelate epimerase DapF (DAP epimerase) from Mycobacterium tuberculosis H37Rv

 Score = 86.3 bits (212), Expect = 7e-22
 Identities = 80/296 (27%), Positives = 126/296 (42%), Gaps = 37/296 (12%)

Query: 1   MKFTKMHGLGNDYIYVDAISQKIENPNEISKFVSDRHFGIGSDGLVLI------------ 48
           M F K HG  ND++ +  +  ++         + DR  G+G+DG++ +            
Sbjct: 1   MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVL 60

Query: 49  --LPSDV--ADFKMRMFNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVL 104
             LP  V   D+ M   N+DGS A+MCGN +R    ++    +  +    + +LAG + +
Sbjct: 61  DSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPV 120

Query: 105 EMTIENGKVVLVKVDMGEPI-LKAEEIPVLSEKHPVIDEEITAKDYCYNFTCVSMGNPH- 162
                      V VDMG+   L A E  V   +              ++   V +GNPH 
Sbjct: 121 TCHHVEAAYADVSVDMGKANRLGAGEAVVGGRR--------------FHGLAVDVGNPHL 166

Query: 163 -AITYIENVDEFPLEKIG-PLFEIHEKFPRKTNVEFVELIDKNTVKMRVWERGAGETLAC 220
             +     VD      +G P+     +FP   NVE +       V MRV ERG GET +C
Sbjct: 167 ACVDSQLTVDGLAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSC 226

Query: 221 GTGACAVLTASVLK-GYVGRKATVKLLGGDLTIEWNEFDKHIYMTGPATTVFEGEI 275
           GTG  A   A++   G      TV + GG++ +     D   ++ GP+  V  G++
Sbjct: 227 GTGTVAAAVAALAAVGSPTGTLTVHVPGGEVVV--TVTDATSFLRGPSVLVARGDL 280