Pairwise Alignments

Query, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

Subject, 282 a.a., diaminopimelate epimerase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  125 bits (313), Expect = 1e-33
 Identities = 88/280 (31%), Positives = 133/280 (47%), Gaps = 24/280 (8%)

Query: 3   FTKMHGLGNDYIYVDA--ISQKIENPNEISKFVSDRHFGIGSDGLVLILPSDV---ADFK 57
           F K+HG GND++++D   +   +E   + ++ +  R FG+G+DGLV +  +     AD+ 
Sbjct: 10  FHKLHGCGNDFVFIDNRHLKLSVEAMPDWARSICRRAFGVGADGLVFLDTAPQGHEADYI 69

Query: 58  MRMFNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEMTIENGKVVLVK 117
              +N+DGS AEMCGNA RC      D            T AGI      +E G     K
Sbjct: 70  WHFYNADGSRAEMCGNASRCAAVLAVDLGFAGPRH-AFGTDAGIVHAVADVEAG---YAK 125

Query: 118 VDMGEPILKAEEIPVLSEKHPVIDEEITAKDYCYNFTCVSMGNPHAITYIENVDEFPLEK 177
           V++  P   A    +  E  P            +    V+ G PHA+ + ++VD   L +
Sbjct: 126 VELTRPRDLAAGTTLELEGTP------------FTVHFVNTGVPHAVVFSDSVDGLDLRR 173

Query: 178 IGPLFEIHEKF-PRKTNVEFVELIDKNTVKMRVWERGA-GETLACGTGACAVLTASVLKG 235
           +G     H  F P  TN  F  +ID+ T+ +R +ERG   ET ACGTGA A    +   G
Sbjct: 174 LGAALRYHPHFSPAGTNANFASIIDRRTIHLRTYERGVEDETYACGTGAAATAFIAHTLG 233

Query: 236 YVGRKATVKLLGGDLTIEWNEFDKHIYMTGPATTVFEGEI 275
                  V+  GG++ +  +  D  I+++G A  VF GE+
Sbjct: 234 LTDASVGVRTSGGEV-LGIDIEDGSIFLSGKAVRVFSGEM 272