Pairwise Alignments

Query, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

Subject, 267 a.a., diaminopimelate epimerase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  280 bits (715), Expect = 3e-80
 Identities = 142/276 (51%), Positives = 184/276 (66%), Gaps = 14/276 (5%)

Query: 1   MKFTKMHGLGNDYIYVDAISQKIENPNEISKFVSDRHFGIGSDGLVLILPSDVADFKMRM 60
           +KFTKMHG GNDYIYVD     I  P + +   S  H GIGSDGL+LI  SD ADF MR+
Sbjct: 5   IKFTKMHGAGNDYIYVDTTRYPIAAPEKKAIEWSKFHTGIGSDGLILIGSSDKADFSMRI 64

Query: 61  FNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEMTIENGKVVLVKVDM 120
           FN+DGSEA MCGN  RCVGK+VY+  +T K  IT++T +GIKVL++ +E GKV  V VDM
Sbjct: 65  FNADGSEAMMCGNGSRCVGKYVYEYGLTAKKEITLDTRSGIKVLKLHVEGGKVTAVTVDM 124

Query: 121 GEPILKAEEIPVLSEKHPVIDEEITAKDYCYNFTCVSMGNPHAITYIENVDEFPLEKIGP 180
           G P L+ E +                  + +  T VSMGNPH +T++E++ +  L +IGP
Sbjct: 125 GSP-LETEAVDF-------------GDQFPFQSTRVSMGNPHLVTFVEDITQINLPEIGP 170

Query: 181 LFEIHEKFPRKTNVEFVELIDKNTVKMRVWERGAGETLACGTGACAVLTASVLKGYVGRK 240
             E +  FP +TNVEF +++ K+T++MRVWERG+G T ACGTGACA   A+VL G  GRK
Sbjct: 171 QLENYHLFPDRTNVEFAQIVGKDTIRMRVWERGSGITQACGTGACATAVAAVLHGLAGRK 230

Query: 241 ATVKLLGGDLTIEWNEFDKHIYMTGPATTVFEGEID 276
             + + GG +TIEW E   HI MTGPAT VF+GE++
Sbjct: 231 CDIIMDGGTVTIEWEEATGHILMTGPATKVFDGEME 266